RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 C8orf33Q9H7E9 229 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 TOPORSQ9NS56 1045 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 SLC38A7Q9NVC3 462 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 TPCN1Q9ULQ1 816 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 MAFFQ9ULX9 164 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 WASF3Q9UPY6 502 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 BPTFQ12830 3046 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 IGSF10Q6WRI0 2623 aa7.95□□□□□ -1.14
ATXN3-219ENST00000553488 SETXQ7Z333 2677 aaKnown RBP7.95□□□□□ -1.14
ATXN3-219ENST00000553488 CCDC163A0A0D9SF12 145 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 M0QZQ0 153 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 EXTL3O43909 919 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 KCNK5O95279 499 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 PRAMEF12O95522 483 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 RPA1P27694 616 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 MZF1P28698 734 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 PON2Q15165 354 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 PPP2R5AQ15172 486 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ZNF568Q3ZCX4 644 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 GAREM2Q75VX8 874 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 CEP68Q76N32 757 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 KBTBD6Q86V97 674 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 FMR1NBQ8N0W7 255 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 SYNPOQ8N3V7 929 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 CSGALNACT1Q8TDX6 532 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 EDEM1Q92611 657 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ZFYVE19Q96K21 471 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ZNF512Q96ME7 567 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ACO2Q99798 780 aaKnown RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 LSM14BQ9BX40 385 aaKnown RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 GPR88Q9GZN0 384 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 SMG9Q9H0W8 520 aaKnown RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 SMOC1Q9H4F8 434 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 SLITRK6Q9H5Y7 841 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 POLD4Q9HCU8 107 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ABI2Q9NYB9 513 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 GTSE1Q9NYZ3 720 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 TMEM63CQ9P1W3 806 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ARHGAP28Q9P2N2 729 aa7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ORC3Q9UBD5 711 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-219ENST00000553488 ARHGEF35A5YM69 484 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 BTBD18B2RXH4 712 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 RPP40O75818 363 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 AKAP3O75969 853 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 OAZ2O95190 189 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 LARGE1O95461 756 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 RPLP1P05386 114 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 OR4Q2P0C623 313 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 C1QTNF9P0C862 333 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 MCF2P10911 925 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 RPL9P32969 192 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 MCM4P33991 863 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 MPLP40238 635 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 PXNP49023 591 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 AARSP49588 968 aaKnown RBP eCLIP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 KPNA1P52294 538 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 YARSP54577 528 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 OSTNP61366 133 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TNK2Q07912 1038 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 COL9A2Q14055 689 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 ARHGAP29Q52LW3 1261 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TCEAL6Q6IPX3 200 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 UNQ6494/PRO21346Q6UXR6 183 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 ARID3BQ8IVW6 561 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 DMRTC2Q8IXT2 367 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 YAF2Q8IY57 180 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 DIS3L2Q8IYB7 885 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 DAW1Q8N136 415 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 DTWD1Q8N5C7 304 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TTC9BQ8N6N2 239 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 C12orf50Q8NA57 414 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 APPL2Q8NEU8 664 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TTC8Q8TAM2 541 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 KIFAP3Q92845 792 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TCEAL3Q969E4 200 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 PLD4Q96BZ4 506 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 ZC3H10Q96K80 434 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TBC1D32Q96NH3 1257 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 NSUN5Q96P11 429 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 CCDC94Q9BW85 323 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 BRMS1Q9HCU9 246 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 PDRG1Q9NUG6 133 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 OBP2AQ9NY56 170 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 TUBGCP4Q9UGJ1 667 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 EGFL7Q9UHF1 273 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 NUB1Q9Y5A7 615 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 PCDHGA5Q9Y5G8 931 aa7.93□□□□□ -1.14
ATXN3-219ENST00000553488 MYO18AQ92614 2054 aaKnown RBP7.93□□□□□ -1.14
ATXN3-219ENST00000553488 ACACAQ13085 2346 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 CEP192Q8TEP8 1941 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 MTMR11A4FU01 709 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 FZD6O60353 706 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
ATXN3-219ENST00000553488 MUTP22033 750 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 NPTX2P47972 431 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 MAPK7Q13164 816 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 GPR17Q13304 367 aa7.92□□□□□ -1.14
ATXN3-219ENST00000553488 PLD1Q13393 1074 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms