RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 DCAF17Q5H9S7 520 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-209ENST00000553280 FAM102AQ5T9C2 384 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-209ENST00000553280 AGAP9Q5VTM2 703 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 TSHZ3Q63HK5 1081 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 SLFN13Q68D06 897 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 RETSATQ6NUM9 610 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 LAYNQ6UX15 382 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 SLC30A10Q6XR72 485 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 CIR1Q86X95 450 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-209ENST00000553280 TICAM2Q86XR7 235 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 RHOT2Q8IXI1 618 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 SIMC1Q8NDZ2 872 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 NSUN7Q8NE18 718 aaKnown RBP5.84□□□□□ -1.47
SCFD1-209ENST00000553280 BPIFB1Q8TDL5 484 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 ASB12Q8WXK4 309 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 PPP2R3CQ969Q6 453 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 PYM1Q9BRP8 204 aaKnown RBP5.84□□□□□ -1.47
SCFD1-209ENST00000553280 RIC8AQ9NPQ8 531 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 GGA3Q9NZ52 723 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 HPSEQ9Y251 543 aa5.84□□□□□ -1.47
SCFD1-209ENST00000553280 HMX3A6NHT5 357 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 E7ENX8 843 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 PIAS2O75928 621 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 USP1O94782 785 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 RHOBTB3O94955 611 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 RASAL1O95294 804 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 CENPBP07199 599 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-209ENST00000553280 HK1P19367 917 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 TNFAIP3P21580 790 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 KCNA3P22001 575 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 ZNF134P52741 427 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 LOXL3P58215 753 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 AP2B1P63010 937 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 TAP2Q03519 686 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 FOXL1Q12952 345 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 ATP1A4Q13733 1029 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 HYIQ5T013 277 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 CACHD1Q5VU97 1274 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 ZNF585AQ6P3V2 769 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 TMPRSS9Q7Z410 1059 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 MAATS1Q7Z4T9 603 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 LRRTM4Q86VH4 590 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 TMTC1Q8IUR5 882 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 SLC44A2Q8IWA5 706 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-209ENST00000553280 ZNF483Q8TF39 744 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-209ENST00000553280 DVL3Q92997 716 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-209ENST00000553280 SDCCAG3Q96C92 435 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 MED15Q96RN5 788 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 RTKNQ9BST9 563 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 PTDSS2Q9BVG9 487 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 MEGF9Q9H1U4 602 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 WASH6PQ9NQA3 447 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 PRDM8Q9NQV8 689 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 CTTNBP2NLQ9P2B4 639 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 IFT80Q9P2H3 777 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-209ENST00000553280 LPAR3Q9UBY5 353 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 SLC13A4Q9UKG4 626 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 TMEM98Q9Y2Y6 226 aa5.83□□□□□ -1.48
SCFD1-209ENST00000553280 PCDH17O14917 1159 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 DNPH1O43598 174 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 RGS10O43665 173 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 CCNT2O60583 730 aaKnown RBP5.82□□□□□ -1.48
SCFD1-209ENST00000553280 POLBP06746 335 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 ANXA6P08133 673 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 FAM163BP0C2L3 166 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SPATA31D3P0C874 917 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 GYS1P13807 737 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 CHRM3P20309 590 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 CNTFP26441 200 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 ALDH18A1P54886 795 aaKnown RBP5.82□□□□□ -1.48
SCFD1-209ENST00000553280 MYO1EQ12965 1108 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 ATPAF1Q5TC12 328 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-209ENST00000553280 ANKRD45Q5TZF3 282 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 NAIF1Q69YI7 327 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SPATA31D4Q6ZUB0 917 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 RASGRP3Q8IV61 690 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 NRSN1Q8IZ57 195 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 D2HGDHQ8N465 521 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SCAMP5Q8TAC9 235 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 THAP4Q8WY91 577 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 HERVK_113Q902F9 699 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 RILPL2Q969X0 211 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 MIEF2Q96C03 454 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 ZDHHC12Q96GR4 267 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 GNRHR2Q96P88 292 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 OR14A2Q96R54 314 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SEC62Q99442 399 aaKnown RBP5.82□□□□□ -1.48
SCFD1-209ENST00000553280 NEU1Q99519 415 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 C1QTNF3Q9BXJ4 246 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SLC25A32Q9H2D1 315 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 TMPRSS5Q9H3S3 457 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 UNC45AQ9H3U1 944 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SMOC2Q9H3U7 446 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 HSFX1Q9UBD0 423 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 FEM1BQ9UK73 627 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 NEU2Q9Y3R4 380 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SCINQ9Y6U3 715 aa5.82□□□□□ -1.48
SCFD1-209ENST00000553280 SPATA31A3Q5VYP0 1347 aa5.81□□□□□ -1.48
SCFD1-209ENST00000553280 TISP43B9A030 160 aa5.81□□□□□ -1.48
SCFD1-209ENST00000553280 hCG_1984214I3L0E3 225 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms