RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 RBBP8NLQ8NC74 664 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF397Q8NF99 534 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 STK32AQ8WU08 396 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 ELSPBP1Q96BH3 223 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 MSANTD3Q96H12 275 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 SHDQ96IW2 340 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 HSFY1Q96LI6 401 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 MED15Q96RN5 788 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 ERGIC2Q96RQ1 377 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 CRACR2AQ9BSW2 395 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 NUP58Q9BVL2 599 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 TSPY26PQ9H489 355 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 KRT82Q9NSB4 513 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 TMLHEQ9NVH6 421 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 MAGED2Q9UNF1 606 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 A0A1W2PQC6 194 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 C2CD4DB7Z1M9 353 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 ANHXE9PGG2 379 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SLC9A3R1O14745 358 aaPredicted RBP10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 XPO1O14980 1071 aaKnown RBP10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 ATP2C2O75185 946 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 VNN2O95498 520 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 TPM1P09493 284 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 RALAP11233 206 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 GLULP15104 373 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 ATF6P18850 670 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 KRT9P35527 623 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 MLLT6P55198 1093 aaPredicted RBP10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 MTA1Q13330 715 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SYCP1Q15431 976 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 PTPN21Q16825 1174 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF394Q53GI3 561 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 MIIPQ5JXC2 388 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 PRSS36Q5K4E3 855 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 KLHDC7AQ5VTJ3 777 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SNX30Q5VWJ9 437 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 CC2D1AQ6P1N0 951 aaPredicted RBP10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 RRAGAQ7L523 313 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 CACNA2D4Q7Z3S7 1137 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 RNF135Q8IUD6 432 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 YAF2Q8IY57 180 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SCML4Q8N228 414 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF276Q8N554 614 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 CELF5Q8N6W0 485 aaKnown RBP10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SHC3Q92529 594 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 IRF7Q92985 503 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 FAM84AQ96KN4 292 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 FUCA2Q9BTY2 467 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SDCBP2Q9H190 292 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 VPS16Q9H269 839 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 LRRC4Q9HBW1 653 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 IL37Q9NZH6 218 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 SCML2Q9UQR0 700 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 PRUNE2Q8WUY3 3088 aa10.85□□□□□ -0.67
TRAFD1-208ENST00000552890 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 FAM92AA1XBS5 289 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 UCHL3P15374 230 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 HMGA1P17096 107 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 GNA15P30679 374 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 USP8P40818 1118 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 STAT1P42224 750 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 KPNA1P52294 538 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 PREPLQ4J6C6 727 aaPredicted RBP10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 ARHGAP29Q52LW3 1261 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 HECTD3Q5T447 861 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 GPR158Q5T848 1215 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 PHLDB3Q6NSJ2 640 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 KLHDC10Q6PID8 442 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 TMC8Q8IU68 726 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 CMTM8Q8IZV2 173 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 SIX6OS1Q8N1H7 587 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 C12orf29Q8N999 325 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 CCDC26Q8TAB7 109 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 WHAMMQ8TF30 809 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 GIPC2Q8TF65 315 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 KCTD13Q8WZ19 329 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 ASB16Q96NS5 453 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 NACA2Q9H009 215 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 CRISPLD1Q9H336 500 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 KCNK12Q9HB15 430 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 TRPV5Q9NQA5 729 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 CNGB3Q9NQW8 809 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 OLA1Q9NTK5 396 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 FAM49BQ9NUQ9 324 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 TAB2Q9NYJ8 693 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 CLIC5Q9NZA1 410 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 DNAJC12Q9UKB3 198 aa10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 MRPS17Q9Y2R5 130 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-208ENST00000552890 PI4K2BG5E9Z4 385 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 O00370 1275 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 LSM8O95777 96 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms