RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
TMEM116-217ENST00000552801 CEP250Q9BV73 2442 aa9.31□□□□□ -0.92
TMEM116-217ENST00000552801 DMDP11532 3685 aa9.31□□□□□ -0.92
TMEM116-217ENST00000552801 DMXL1Q9Y485 3027 aa9.31□□□□□ -0.92
TMEM116-217ENST00000552801 SPAG17Q6Q759 2223 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 ZNF233A6NK53 670 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-217ENST00000552801 GDF9O60383 454 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 ALDH1A2O94788 518 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 EPN2O95208 641 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 ZNF806P0C7X5 589 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 HDCP19113 662 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 GJA4P35212 333 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 MPLP40238 635 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 GCGRP47871 477 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 GALK1P51570 392 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 AMPD3Q01432 767 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 GRIN1Q05586 938 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 SF3A2Q15428 464 aaKnown RBP9.3□□□□□ -0.92
TMEM116-217ENST00000552801 DUOXA2Q1HG44 320 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 KLHL40Q2TBA0 621 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 USP39Q53GS9 565 aaKnown RBP9.3□□□□□ -0.92
TMEM116-217ENST00000552801 RNF43Q68DV7 783 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 HS2ST1Q7LGA3 356 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 KBTBD6Q86V97 674 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 TRMT2BQ96GJ1 504 aaKnown RBP9.3□□□□□ -0.92
TMEM116-217ENST00000552801 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
TMEM116-217ENST00000552801 HPDLQ96IR7 371 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 SYT15Q9BQS2 421 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 PANK2Q9BZ23 570 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 MTMR12Q9C0I1 747 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 ECT2Q9H8V3 914 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 GRPEL1Q9HAV7 217 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 KIAA1586Q9HCI6 787 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 HPS4Q9NQG7 708 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 ANGPTL2Q9UKU9 493 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 CDH9Q9ULB4 789 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 L1RE1Q9UN81 338 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 SRPRBQ9Y5M8 271 aaKnown RBP9.3□□□□□ -0.92
TMEM116-217ENST00000552801 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 WNT6Q9Y6F9 365 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 DCHS1Q96JQ0 3298 aa9.3□□□□□ -0.92
TMEM116-217ENST00000552801 CACNA1AO00555 2505 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 OBSL1O75147 1896 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 MYMKA6NI61 221 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 SLC9A3R1O14745 358 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 NOL4O94818 638 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 HMGA1P17096 107 aaKnown RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 TNNI1P19237 187 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 TRIM21P19474 475 aaKnown RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 ADSSP30520 456 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 LIMK1P53667 647 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 COPS2P61201 443 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 TNNC1P63316 161 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 TRPC3Q13507 836 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 DMC1Q14565 340 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 STK38Q15208 465 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 CFAP221Q4G0U5 840 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 STPG1Q5TH74 334 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 DAB2IPQ5VWQ8 1189 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 LMBRD2Q68DH5 695 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 CRELD2Q6UXH1 353 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 SYT13Q7L8C5 426 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 ARL14EPQ8N8R7 260 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 C1orf127Q8N9H9 656 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 STKLD1Q8NE28 680 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 SH3RF2Q8TEC5 729 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 CHFRQ96EP1 664 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 SPACA7Q96KW9 195 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 FIZ1Q96SL8 496 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 NACA2Q9H009 215 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 PDE11AQ9HCR9 933 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 OLFML3Q9NRN5 406 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 TMLHEQ9NVH6 421 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 GDAP2Q9NXN4 497 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 BCCIPQ9P287 314 aaKnown RBP eCLIP9.29□□□□□ -0.92
TMEM116-217ENST00000552801 GPR179Q6PRD1 2367 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 ATP8B3O60423 1300 aa9.29□□□□□ -0.92
TMEM116-217ENST00000552801 GOLGA6L22H0YM25 854 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PHACTR2O75167 634 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 CAVIN2O95810 425 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PDGFRBP09619 1106 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 DLATP10515 647 aaKnown RBP9.28□□□□□ -0.92
TMEM116-217ENST00000552801 CD46P15529 392 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PFKLP17858 780 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 BDNFP23560 247 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 MAGEA11P43364 429 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PPP3CCP48454 512 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 SEC13P55735 322 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 ZNF445P59923 1031 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PSMC1P62191 440 aaKnown RBP9.28□□□□□ -0.92
TMEM116-217ENST00000552801 ASIC1P78348 528 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 KCNA1Q09470 495 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PREPLQ4J6C6 727 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-217ENST00000552801 C2orf27AQ580R0 203 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms