RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 EMSYQ7Z589 1322 aa6.38□□□□□ -1.39
CHMP4A-210ENST00000552620 LOXHD1Q8IVV2 1947 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 SIPA1L1O43166 1804 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 NRXN2Q9P2S2 1712 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 RPTORQ8N122 1335 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 PASKQ96RG2 1323 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 IGSF9BQ9UPX0 1349 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 K7ENM7 598 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CHUKO15111 745 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 DKC1O60832 514 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ZC3H11AO75152 810 aaKnown RBP eCLIP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CAND2O75155 1236 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 RASSF9O75901 435 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 DNAJC8O75937 253 aaPredicted RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TP53P04637 393 aaPredicted RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 GSTA1P08263 222 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ITIH2P19823 946 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 IBSPP21815 317 aaPredicted RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TMOD1P28289 359 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 POLD1P28340 1107 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ATP5DP30049 168 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ETV3P41162 512 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 SLC1A1P43005 524 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 QARSP47897 775 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 GPC3P51654 580 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 HSD17B4P51659 736 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 MNAT1P51948 309 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 PLTPP55058 493 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 NCKAP1LP55160 1127 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 RWDD2BP57060 319 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 BPIFB4P59827 614 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 JAG1P78504 1218 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 PPP3CAQ08209 521 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 SQSTM1Q13501 440 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 RRP1BQ14684 758 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 MESDQ14696 234 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TCEA2Q15560 299 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 PTPROQ16827 1216 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 SHROOM1Q2M3G4 852 aaPredicted RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TNFAIP8L3Q5GJ75 292 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 KRT39Q6A163 491 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 MFSD5Q6N075 450 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 PPP1R2P3Q6NXS1 205 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC174Q6PII3 467 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC137Q6PK04 289 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ZDHHC24Q6UX98 284 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CEP128Q6ZU80 1094 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 LDHDQ86WU2 507 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 KSR1Q8IVT5 923 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 C4orf19Q8IY42 314 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 DAW1Q8N136 415 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC197Q8NCU1 140 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 RDM1Q8NG50 284 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 IPO4Q8TEX9 1081 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 SHC3Q92529 594 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ALG3Q92685 438 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 GLG1Q92896 1179 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 CD101Q93033 1021 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 ART4Q93070 314 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 PRMT6Q96LA8 375 aaPredicted RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 MIPEPQ99797 713 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TRIM51Q9BSJ1 452 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TRIM31Q9BZY9 425 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 NSRP1Q9H0G5 558 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 BCAS3Q9H6U6 928 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 LRRC19Q9H756 370 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 C17orf75Q9HAS0 396 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 AGO4Q9HCK5 861 aaKnown RBP6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 TMEM8AQ9HCN3 771 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 POLD4Q9HCU8 107 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 FAM86C1Q9NVL1 165 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 GRHL1Q9NZI5 618 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 HSPBP1Q9NZL4 362 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 GTF3C4Q9UKN8 822 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 COQ4Q9Y3A0 265 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 NR2E1Q9Y466 385 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 UBIAD1Q9Y5Z9 338 aa6.37□□□□□ -1.39
CHMP4A-210ENST00000552620 AFF2P51816 1311 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC163A0A0D9SF12 145 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 CCT8L1PA6NM43 557 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 RASGRF2O14827 1237 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 PLSCR1O15162 318 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 CTNND1O60716 968 aaKnown RBP6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 LRRN2O75325 713 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 TCEA3O75764 348 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 SGPL1O95470 568 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 ICAM1P05362 532 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 MYBL1P10243 752 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 CHN1P15882 459 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 CHRNB2P17787 502 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 ITGB5P18084 799 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 SCP2P22307 547 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 SFNP31947 248 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 RDXP35241 583 aaKnown RBP6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 ECE1P42892 770 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 GCLMP48507 274 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 RARRES1P49788 294 aa6.36□□□□□ -1.39
CHMP4A-210ENST00000552620 MXI1P50539 228 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms