RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 FBXO47Q5MNV8 452 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TFAP2BQ92481 460 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ZNF669Q96BR6 464 aaPredicted RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ERP27Q96DN0 273 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 SEC16BQ96JE7 1060 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 MRPL45Q9BRJ2 306 aaKnown RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 RBPJLQ9UBG7 517 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 CREB1P16220 341 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PRPSAP1Q14558 356 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 KCNV1Q6PIU1 500 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TADA2BQ86TJ2 420 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 NUDCD3Q8IVD9 361 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 RAB3IL1Q8TBN0 382 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 MRIQ9BWK5 157 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PABPC3Q9H361 631 aaKnown RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PCDHGC5Q9Y5F6 944 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 LRRC37A3O60309 1634 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TRIM49D1C9J1S8 452 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PDHA1P08559 390 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 ESRRAP11474 423 aaPredicted RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 BRCC3P46736 316 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 CDK17Q00537 523 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 MFSD10Q14728 455 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TCEA2Q15560 299 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PPEF2O14830 753 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 GPC4O75487 556 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 JCHAINP01591 159 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 ENO1P06733 434 aaKnown RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 MYBL1P10243 752 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 ASPHQ12797 758 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 COL9A2Q14055 689 aaPredicted RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 BRSK2Q8IWQ3 736 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 LRRC43Q8N309 656 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 GPR20Q99678 358 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TIPINQ9BVW5 301 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 DPEP3Q9H4B8 488 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PCDHA2Q9Y5H9 948 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 SNX10Q9Y5X0 201 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 EDIL3O43854 480 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 KRT37O76014 449 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 HSPA4LO95757 839 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 RBL1P28749 1068 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 EFEMP1Q12805 493 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TFDP3Q5H9I0 405 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM71AQ8IYT1 594 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 CPXM1Q96SM3 734 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 TTC1Q99614 292 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.24□□□□□ -0.618e-6■■■□□ 15.8
TGFBR1-209ENST00000552516 TULP2O00295 520 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM200BP0CF97 657 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 CXCR3P49682 368 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 IL1RL1Q01638 556 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 FASTKD3Q14CZ7 662 aaKnown RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 SH2D4BQ5SQS7 431 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 PPP1R26Q5T8A7 1209 aaPredicted RBP11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 SRLQ86TD4 932 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 DEFB106AQ8N104 65 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 NDUFAF2Q8N183 169 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 ECT2Q9H8V3 914 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 C17orf75Q9HAS0 396 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 SIX2Q9NPC8 291 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 SLC27A5Q9Y2P5 690 aa11.24□□□□□ -0.61
TGFBR1-209ENST00000552516 WNT7BP56706 349 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SCARA3Q6AZY7 606 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 ACTRT1Q8TDG2 376 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 CLEC4CQ8WTT0 213 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 ZNF560Q96MR9 790 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 PTPRJQ12913 1337 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 MYH8P13535 1937 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 TBC1D12O60347 775 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 CD52P31358 61 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SLC1A1P43005 524 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 NME5P56597 212 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 PTENP60484 403 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 ZACNQ401N2 412 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SPATA6LQ8N4H0 392 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SHC3Q92529 594 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 GLT1D1Q96MS3 346 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 EPN3Q9H201 632 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 SP110Q9HB58 689 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 CYP4F12Q9HCS2 524 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 TMPRSS4Q9NRS4 437 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
TGFBR1-209ENST00000552516 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms