RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	NAB2	Q15742	525 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	NKG7	Q16617	165 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	SPOUT1	Q5T280	376 aa	Known RBP	7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	ALKAL1	Q6UXT8	129 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	STXBP4	Q6ZWJ1	553 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	TMEM173	Q86WV6	379 aa	Predicted RBP	7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	ZNF280B	Q86YH2	543 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	SPACA3	Q8IXA5	215 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	COLGALT2	Q8IYK4	626 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	THNSL1	Q8IYQ7	743 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	SLC39A11	Q8N1S5	342 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	ASB11	Q8WXH4	323 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	HPS3	Q969F9	1004 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	MRPL38	Q96DV4	380 aa	Known RBP	7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	SNX27	Q96L92	541 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	ACCS	Q96QU6	501 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	RPS6KC1	Q96S38	1066 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	TMEM175	Q9BSA9	504 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	CCDC94	Q9BW85	323 aa	Predicted RBP	7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	GBP3	Q9H0R5	595 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	LMAN2L	Q9H0V9	348 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	CXCL16	Q9H2A7	254 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	NRDE2	Q9H7Z3	1164 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	ALG13	Q9NP73	1137 aa	Known RBP	7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	TOPORS	Q9NS56	1045 aa	Predicted RBP	7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	DNAJB4	Q9UDY4	337 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	EXOC7	Q9UPT5	735 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	MAPK8IP1	Q9UQF2	711 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	GDA	Q9Y2T3	454 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	MTCH2	Q9Y6C9	303 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	DOCK8	Q8NF50	2099 aa		7.23	□□□□□ -1.25
CNOT2-238	ENST00000552422	TTC26	A0AVF1	554 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	ANKRD63	C9JTQ0	380 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	OGT	O15294	1046 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	PRPF6	O94906	941 aa	Known RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	SLITRK5	O94991	958 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	GALT	P07902	379 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	RNASE1	P07998	156 aa	Known RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	CLTA	P09496	248 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	CXCL8	P10145	99 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	HARS	P12081	509 aa	Known RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	DNAJB1	P25685	340 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	ADSS	P30520	456 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	MATR3	P43243	847 aa	Known RBP eCLIP	7.22	□□□□□ -1.25	2e-6	■■■■□ 20.3
CNOT2-238	ENST00000552422	SLC11A1	P49279	550 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	YARS	P54577	528 aa	Known RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	OSTN	P61366	133 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	IKZF1	Q13422	519 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	POSTN	Q15063	836 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	KYAT1	Q16773	422 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	PTPRO	Q16827	1216 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	BMT2	Q1RMZ1	405 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	SLC10A6	Q3KNW5	377 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	TIGD5	Q53EQ6	642 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	XKR4	Q5GH76	650 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	GLRA4	Q5JXX5	417 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	SLFN12L	Q6IEE8	588 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	MFSD2A	Q8NA29	543 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	KIAA0895	Q8NCT3	520 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	MAFA	Q8NHW3	353 aa	Predicted RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	SPPL3	Q8TCT6	385 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	SCFD1	Q8WVM8	642 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	CCDC34	Q96HJ3	373 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	IGSF21	Q96ID5	467 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	TIGD1	Q96MW7	591 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	ACAP3	Q96P50	834 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	FAM193B	Q96PV7	902 aa	Predicted RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	PPP1R10	Q96QC0	940 aa	Known RBP	7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	MSTO1	Q9BUK6	570 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	IKZF4	Q9H2S9	585 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	EXOC1	Q9NV70	894 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	MIOS	Q9NXC5	875 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	SPG21	Q9NZD8	308 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	ADAMTS6	Q9UKP5	1117 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	LZTS1	Q9Y250	596 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	DENND4C	Q5VZ89	1909 aa		7.22	□□□□□ -1.25
CNOT2-238	ENST00000552422	MYO10	Q9HD67	2058 aa		7.21	□□□□□ -1.25
CNOT2-238	ENST00000552422	ZNF638	Q14966	1978 aa	Known RBP	7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	SMIM28	A0A1B0GU29	152 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	NT5C1B-RDH14	C9J2C7	533 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	NRP1	O14786	923 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	KIN	O60870	393 aa	Known RBP	7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	RHOBTB3	O94955	611 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	EFEMP2	O95967	443 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	RPN1	P04843	607 aa	Known RBP	7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	TH	P07101	528 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	ADRB2	P07550	413 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	KCNE1	P15382	129 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	TFE3	P19532	575 aa	Predicted RBP	7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	TNFSF9	P41273	254 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	UBE2H	P62256	183 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	POU5F1	Q01860	360 aa	Known RBP	7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	KRT17	Q04695	432 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	STK4	Q13043	487 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	TUSC3	Q13454	348 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	KCNB1	Q14721	858 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	NKPD1	Q17RQ9	610 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	SEZ6	Q53EL9	994 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	ZBTB41	Q5SVQ8	909 aa		7.21	□□□□□ -1.26
CNOT2-238	ENST00000552422	SFRP5	Q5T4F7	317 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms