RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 FAM200BP0CF97 657 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 VDRP11473 427 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 HMGA1P17096 107 aaKnown RBP11.26□□□□□ -0.61
PTCH1-225ENST00000551845 GJA1P17302 382 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 PON1P27169 355 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 ADORA2BP29275 332 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 NBL1P41271 181 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-225ENST00000551845 SLC8A3P57103 927 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 NCAPHQ15003 741 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 TEAD2Q15562 447 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 SLC5A9Q2M3M2 681 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 ZSCAN23Q3MJ62 389 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 MIIPQ5JXC2 388 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 TMEM270Q6UE05 265 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 TMC8Q8IU68 726 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 FUKQ8N0W3 1084 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 AOPEPQ8N6M6 819 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 SLC4A11Q8NBS3 891 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 ING5Q8WYH8 240 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 NKD2Q969F2 451 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-225ENST00000551845 TCEAL4Q96EI5 215 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 MYRFLQ96LU7 910 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 KCNK16Q96T55 309 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 FUCA2Q9BTY2 467 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 KCNK12Q9HB15 430 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 DMAP1Q9NPF5 467 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-225ENST00000551845 COMMD8Q9NX08 183 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 TAB2Q9NYJ8 693 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 ZMYM5Q9UJ78 669 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 VWA8A3KMH1 1905 aa11.26□□□□□ -0.61
PTCH1-225ENST00000551845 ANK1P16157 1881 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 PDCD11Q14690 1871 aaKnown RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 ZDBF2Q9HCK1 2354 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 SOBPA7XYQ1 873 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 MOSPD3O75425 235 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 NOL4O94818 638 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 RTN3O95197 1032 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 F11P03951 625 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 PAEPP09466 180 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 CCDC130P13994 396 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 CD19P15391 556 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 CCR2P41597 374 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 PPP3CCP48454 512 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 MAP3K7CLP57077 242 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 TPM4P67936 248 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 KCNMA1Q12791 1236 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 KRT31Q15323 416 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 SGO2Q562F6 1265 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 PPP1R26Q5T8A7 1209 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 ARHGAP17Q68EM7 881 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 SMYD5Q6GMV2 418 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 MTSS1LQ765P7 747 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 FAM35AQ86V20 835 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 ARHGEF19Q8IW93 802 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 SHKBP1Q8TBC3 707 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 MRPS31Q92665 395 aaKnown RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 KAT5Q92993 513 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 TRMT2BQ96GJ1 504 aaKnown RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 DUSP16Q9BY84 665 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 UBXN6Q9BZV1 441 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 TASP1Q9H6P5 420 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 CSNK1G1Q9HCP0 422 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 ZNF334Q9HCZ1 680 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 HESX1Q9UBX0 185 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 APEX2Q9UBZ4 518 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 LIMA1Q9UHB6 759 aaKnown RBP11.25□□□□□ -0.61
PTCH1-225ENST00000551845 DNAJC12Q9UKB3 198 aa11.25□□□□□ -0.61
PTCH1-225ENST00000551845 TRIOO75962 3097 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ZFHX2Q9C0A1 2572 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ANHXE9PGG2 379 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 RNF225M0QZC1 329 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-225ENST00000551845 BEST1O76090 585 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ASGR2P07307 311 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 KRT5P13647 590 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ZNF18P17022 549 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 CEBPBP17676 345 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 YWHAQP27348 245 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
PTCH1-225ENST00000551845 CACNA2D1P54289 1103 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 TDGQ13569 410 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ARHGAP44Q17R89 818 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 GPR158Q5T848 1215 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 PARM1Q6UWI2 310 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 DHX40Q8IX18 779 aaKnown RBP11.24□□□□□ -0.61
PTCH1-225ENST00000551845 SLC44A3Q8N4M1 653 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 UBR7Q8N806 425 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ANKRD52Q8NB46 1076 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 E2F7Q96AV8 911 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms