RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 FDPSP14324 419 aaKnown RBP15.55■□□□□ 0.08
VPS29-209ENST00000551655 CYP2F1P24903 491 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 STRN3Q13033 797 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 DHCR24Q15392 516 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 CCDC157Q569K6 752 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 BAHD1Q8TBE0 780 aaPredicted RBP15.55■□□□□ 0.08
VPS29-209ENST00000551655 SPATA18Q8TC71 538 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 FCRL3Q96P31 734 aaPredicted RBP15.55■□□□□ 0.08
VPS29-209ENST00000551655 HCN2Q9UL51 889 aa15.55■□□□□ 0.08
VPS29-209ENST00000551655 LEFTY2O00292 366 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 TLX3O43711 291 aaPredicted RBP15.54■□□□□ 0.08
VPS29-209ENST00000551655 FAM189A1O60320 539 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 CDKL5O76039 1030 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 DKK1O94907 266 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 HDCP19113 662 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 ATP2C1P98194 919 aaPredicted RBP15.54■□□□□ 0.08
VPS29-209ENST00000551655 RAD51AP2Q09MP3 1159 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 RESTQ13127 1097 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 KCNB1Q14721 858 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 METTL23Q86XA0 190 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 MIB1Q86YT6 1006 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 DIS3L2Q8IYB7 885 aaKnown RBP15.54■□□□□ 0.08
VPS29-209ENST00000551655 THEM5Q8N1Q8 247 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 TMEM161BQ8NDZ6 487 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 BRMS1Q9HCU9 246 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 ARHGAP26Q9UNA1 814 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 BTBD3Q9Y2F9 522 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 FNDC3AQ9Y2H6 1198 aaKnown RBP15.54■□□□□ 0.08
VPS29-209ENST00000551655 RBM19Q9Y4C8 960 aaKnown RBP15.54■□□□□ 0.08
VPS29-209ENST00000551655 MYH11P35749 1972 aa15.54■□□□□ 0.08
VPS29-209ENST00000551655 PLK4O00444 970 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 ARHGAP6O43182 974 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 XPOTO43592 962 aaKnown RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 OR52Z1P0C646 297 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 NDUFV2P19404 249 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 ACAT1P24752 427 aaKnown RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 EIF2S3P41091 472 aaKnown RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 CLDN6P56747 220 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 CFHR1Q03591 330 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 HSF5Q4G112 596 aaPredicted RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 ZPBP2Q6X784 338 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 DCP1BQ8IZD4 617 aaKnown RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 ADGRG2Q8IZP9 1017 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 PHTF2Q8N3S3 785 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 TRMT2BQ96GJ1 504 aaKnown RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 MYRFLQ96LU7 910 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 SMPD4Q9NXE4 827 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 UXTQ9UBK9 157 aaPredicted RBP15.53■□□□□ 0.08
VPS29-209ENST00000551655 DSEQ9UL01 958 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
VPS29-209ENST00000551655 A0A1W2PQF6 199 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 ANO9A1A5B4 782 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 HCRTO43612 131 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 HOXB2P14652 356 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 TCF3P15923 654 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 BNC1Q01954 994 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 ZNF174Q15697 407 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 HAUS3Q68CZ6 603 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 RINT1Q6NUQ1 792 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 RHBDF2Q6PJF5 856 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 KCNK18Q7Z418 384 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 ZCCHC9Q8N567 271 aaKnown RBP15.52■□□□□ 0.08
VPS29-209ENST00000551655 PDCD7Q8N8D1 485 aaKnown RBP15.52■□□□□ 0.08
VPS29-209ENST00000551655 ZNF513Q8N8E2 541 aaPredicted RBP15.52■□□□□ 0.08
VPS29-209ENST00000551655 RHBDD1Q8TEB9 315 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 BICD1Q96G01 975 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 ZNF419Q96HQ0 510 aaPredicted RBP15.52■□□□□ 0.08
VPS29-209ENST00000551655 DRC1Q96MC2 740 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 ACOX2Q99424 681 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 HNRNPABQ99729 332 aaKnown RBP15.52■□□□□ 0.08
VPS29-209ENST00000551655 GAREM1Q9H706 876 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 RPF1Q9H9Y2 349 aaKnown RBP15.52■□□□□ 0.08
VPS29-209ENST00000551655 TM7SF3Q9NS93 570 aa15.52■□□□□ 0.08
VPS29-209ENST00000551655 TRIM24O15164 1050 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 CILPO75339 1184 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 GRIA2P42262 883 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 SMARCB1Q12824 385 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 MYO1EQ12965 1108 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 DHRS13Q6UX07 377 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 C1orf186Q6ZWK4 172 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 SCN4BQ8IWT1 228 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 GALNT15Q8N3T1 639 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 NAT16Q8N8M0 369 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 FAM124BQ9H5Z6 455 aaPredicted RBP15.51■□□□□ 0.07
VPS29-209ENST00000551655 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.51■□□□□ 0.07
VPS29-209ENST00000551655 RAD54BQ9Y620 910 aa15.51■□□□□ 0.07
VPS29-209ENST00000551655 TMEM131Q92545 1883 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 COL5A1P20908 1838 aaPredicted RBP15.5■□□□□ 0.07
VPS29-209ENST00000551655 A0A0A0MRY4 1105 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 PP2D1A8MPX8 630 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 NDUFS2O75306 463 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 ADRB2P07550 413 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 ADH5P11766 374 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 GNSP15586 552 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 MUTP22033 750 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 TNFRSF4P43489 277 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 TAF6P49848 677 aa15.5■□□□□ 0.07
VPS29-209ENST00000551655 RPL10AP62906 217 aaKnown RBP15.5■□□□□ 0.07
VPS29-209ENST00000551655 TMEM132DQ14C87 1099 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms