RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 R3HCC1Q9Y3T6 440 aaKnown RBP13.89□□□□□ -0.19
NPAS3-209ENST00000551008 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 SOBPA7XYQ1 873 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 A8MXQ7 604 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 MAN2B1O00754 1011 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 IKBKBO14920 756 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 CALUO43852 315 aaPredicted RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 PHACTR2O75167 634 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 MAGEA9P43362 315 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 VAMP7P51809 220 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 NUCB2P80303 420 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 ORC1Q13415 861 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 ZNF268Q14587 947 aaPredicted RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 MAPRE1Q15691 268 aaKnown RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 TSSK4Q6SA08 328 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 Q6ZS52 159 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 YAF2Q8IY57 180 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 ZMIZ2Q8NF64 920 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 TAS1R2Q8TE23 839 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 NKD2Q969F2 451 aaPredicted RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 C8orf48Q96LL4 319 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 TWNKQ96RR1 684 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 UXTQ9UBK9 157 aaPredicted RBP13.88□□□□□ -0.19
NPAS3-209ENST00000551008 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 FBXO4Q9UKT5 387 aa13.88□□□□□ -0.19
NPAS3-209ENST00000551008 DPYSL4O14531 572 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 OLFM2O95897 454 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 GRIK1P39086 918 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 PRCPP42785 496 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 GCLMP48507 274 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
NPAS3-209ENST00000551008 MAMSTRQ6ZN01 415 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 DENND5BQ6ZUT9 1274 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 FAM186BQ8IYM0 893 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 ARL14EPQ8N8R7 260 aaPredicted RBP13.87□□□□□ -0.19
NPAS3-209ENST00000551008 CSGALNACT1Q8TDX6 532 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 SEMA4DQ92854 862 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 CEP295NLQ96MC4 621 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 ELOVL4Q9GZR5 314 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 EBF3Q9H4W6 596 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 C8orf33Q9H7E9 229 aaPredicted RBP13.87□□□□□ -0.19
NPAS3-209ENST00000551008 KIF9Q9HAQ2 790 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 LMAN1LQ9HAT1 526 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 MRPS17Q9Y2R5 130 aaKnown RBP13.87□□□□□ -0.19
NPAS3-209ENST00000551008 PCDHA5Q9Y5H7 936 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 SPAG17Q6Q759 2223 aa13.87□□□□□ -0.19
NPAS3-209ENST00000551008 ZNF840PA6NDX5 716 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 TRIM66O15016 1216 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 LAMTOR5O43504 91 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 GADD45BO75293 160 aaPredicted RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 BEST1O76090 585 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 CCDC130P13994 396 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 AVPR1AP37288 418 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 PIK3CAP42336 1068 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 PGFP49763 221 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 KPNA1P52294 538 aaPredicted RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 NDST1P52848 882 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 CSTF1Q05048 431 aaKnown RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 FAM160A1Q05DH4 1040 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 ENPEPQ07075 957 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 INCA1Q0VD86 236 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 CCINQ13939 588 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 MTF1Q14872 753 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 PON2Q15165 354 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 EDRF1Q3B7T1 1238 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 ZNF528Q3MIS6 628 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 COBLL1Q53SF7 1204 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 ACOT1Q86TX2 421 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 RALGPS2Q86X27 583 aaPredicted RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 SUMF1Q8NBK3 374 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 ZBTB44Q8NCP5 570 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 WHAMMQ8TF30 809 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 MSANTD3Q96H12 275 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 RNF38Q9H0F5 515 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 FBRSL1Q9HCM7 1045 aaKnown RBP13.86□□□□□ -0.19
NPAS3-209ENST00000551008 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 IL37Q9NZH6 218 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
NPAS3-209ENST00000551008 TRAV19A0A0A6YYK7 116 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 TRIM49BA6NDI0 452 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 NCAM2O15394 837 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 LILRB5O75023 590 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 OAS1P00973 400 aaKnown RBP13.85□□□□□ -0.19
NPAS3-209ENST00000551008 TCF3P15923 654 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
NPAS3-209ENST00000551008 BMP6P22004 513 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 PSMC2P35998 433 aaKnown RBP13.85□□□□□ -0.19
NPAS3-209ENST00000551008 SATB1Q01826 763 aa13.85□□□□□ -0.19
NPAS3-209ENST00000551008 TAF10Q12962 218 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms