RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FITM2Q8N6M3 262 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 SHCBP1Q8NEM2 672 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 OR10H5Q8NGA6 315 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 ZFP28Q8NHY6 868 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 TBC1D15Q8TC07 691 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 ADAMTS17Q8TE56 1095 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 SMCR8Q8TEV9 937 aaPredicted RBP6.18□□□□□ -1.42
CPSF6-206ENST00000550987 RAPGEF4Q8WZA2 1011 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 RUBCNQ92622 972 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 SCAMP4Q969E2 229 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 SPSB4Q96A44 273 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 C18orf8Q96DM3 657 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 TBATAQ96M53 351 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 MAGEH1Q9H213 219 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
CPSF6-206ENST00000550987 RRN3Q9NYV6 651 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 POGKQ9P215 609 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 GRHPRQ9UBQ7 328 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 GPR52Q9Y2T5 361 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 KCTD3Q9Y597 815 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 FLNBO75369 2602 aaKnown RBP6.18□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF462Q96JM2 2506 aa6.18□□□□□ -1.42
CPSF6-206ENST00000550987 USP54Q70EL1 1684 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 LAMB2P55268 1798 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 A0A1B0GTL3 188 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 FAM234BA2RU67 622 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 TBKBP1A7MCY6 615 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 PRR5-ARHGAP8B1AHC4 643 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 M0R3H8 397 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 RAB27BO00194 218 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 NPC1O15118 1278 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 INMTO95050 263 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 NDST3O95803 873 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 AGR2O95994 175 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 TXNP10599 105 aaKnown RBP6.17□□□□□ -1.42
CPSF6-206ENST00000550987 XRCC6P12956 609 aaKnown RBP eCLIP6.17□□□□□ -1.429e-12■■■■□ 25
CPSF6-206ENST00000550987 IL1R2P27930 398 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 RAC3P60763 192 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 SATB1Q01826 763 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 KIAA2012Q0VF49 1180 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 NFYCQ13952 458 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 SLC29A2Q14542 456 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 SSPNQ14714 243 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 FAM214AQ32MH5 1076 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF385BQ569K4 471 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ATXN7L2Q5T6C5 722 aaPredicted RBP6.17□□□□□ -1.42
CPSF6-206ENST00000550987 JAKMIP3Q5VZ66 844 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ANKS6Q68DC2 871 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 FRMD5Q7Z6J6 570 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 XYLT1Q86Y38 959 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 CACNA2D3Q8IZS8 1091 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 FAM46DQ8NEK8 389 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 OR56A3Q8NH54 315 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 TFAP2CQ92754 450 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 PHACTR3Q96KR7 559 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 EIF2AK1Q9BQI3 630 aaKnown RBP6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ZHX3Q9H4I2 956 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 AS3MTQ9HBK9 375 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ITM2CQ9NQX7 267 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 SAGE1Q9NXZ1 904 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 XPR1Q9UBH6 696 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF69Q9UC07 566 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 MID2Q9UJV3 735 aa6.17□□□□□ -1.42
CPSF6-206ENST00000550987 ZNF292O60281 2723 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 WNK3Q9BYP7 1800 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 A0A087WWL8 130 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 SH3D21A4FU49 640 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 CDHR4A6H8M9 788 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 TCAF2A6NFQ2 919 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 MROH6A6NGR9 719 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 CLCA1A8K7I4 914 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 PIP5K1BO14986 540 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 DNAJB5O75953 348 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 CHEK2O96017 543 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 SLC6A4P31645 630 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 ARL4CP56559 192 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 GALNT1Q10472 559 aaPredicted RBP6.16□□□□□ -1.42
CPSF6-206ENST00000550987 RIN1Q13671 783 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 POSTNQ15063 836 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 TAF5Q15542 800 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 RAB30Q15771 203 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 PKN2Q16513 984 aaKnown RBP6.16□□□□□ -1.42
CPSF6-206ENST00000550987 TIGD6Q17RP2 521 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 BMT2Q1RMZ1 405 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 ANKRD45Q5TZF3 282 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 FAM160B1Q5W0V3 765 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 EFCAB12Q6NXP0 572 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 FAM111BQ6SJ93 734 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 ADGRE4PQ86SQ3 457 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 FAM83AQ86UY5 434 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 GALNT15Q8N3T1 639 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 IPO4Q8TEX9 1081 aaKnown RBP6.16□□□□□ -1.42
CPSF6-206ENST00000550987 MOGAT1Q96PD6 335 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 CPPED1Q9BRF8 314 aaPredicted RBP6.16□□□□□ -1.42
CPSF6-206ENST00000550987 TMEM120AQ9BXJ8 343 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
CPSF6-206ENST00000550987 ENKD1Q9H0I2 346 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 GPR35Q9HC97 309 aa6.16□□□□□ -1.42
CPSF6-206ENST00000550987 USP40Q9NVE5 1235 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms