RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHMP1A-209ENST00000550872 HESX1Q9UBX0 185 aa17.19■□□□□ 0.34
CHMP1A-209ENST00000550872 USTQ9Y2C2 406 aa17.19■□□□□ 0.34
CHMP1A-209ENST00000550872 C2CD4DB7Z1M9 353 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 NOL4O94818 638 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 FGF19O95750 216 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 CALCAP01258 141 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 GJA1P17302 382 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 BRD2P25440 801 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 GABRR2P28476 465 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 UBASH3AP57075 661 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 POLR2FP61218 127 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 ZP2Q05996 745 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 GOLGA7BQ2TAP0 167 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 PRSS36Q5K4E3 855 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 CLEC20AQ6ZU45 233 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 DENND5BQ6ZUT9 1274 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 TDRD5Q8NAT2 981 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 ANKRD52Q8NB46 1076 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 ZMIZ2Q8NF64 920 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 MYADMQ96S97 322 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 NAA15Q9BXJ9 866 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 STK33Q9BYT3 514 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 GANQ9H2C0 597 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 ATXN3LQ9H3M9 355 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 CSNK1G1Q9HCP0 422 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 NLRC4Q9NPP4 1024 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 TSPAN16Q9UKR8 245 aa17.18■□□□□ 0.34
CHMP1A-209ENST00000550872 A0A1W2PRU2 124 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 O00370 1275 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 NPR3P17342 541 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 CDC25CP30307 473 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 SSTR3P32745 418 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 SLC8A3P57103 927 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 IFRD2Q12894 506 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 NR1I3Q14994 352 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 STILQ15468 1287 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 CNGA2Q16280 664 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 PTPN21Q16825 1174 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 SMYD5Q6GMV2 418 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 GAREM2Q75VX8 874 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 NUP93Q8N1F7 819 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 SHKBP1Q8TBC3 707 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 FGF13Q92913 245 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 MCRS1Q96EZ8 462 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 TRMT2BQ96GJ1 504 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 MYRFLQ96LU7 910 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 NECAB3Q96P71 396 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 GCNAQ96QF7 691 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 EHD2Q9NZN4 543 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 CDH7Q9ULB5 785 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 DAAM1Q9Y4D1 1078 aa17.17■□□□□ 0.34
CHMP1A-209ENST00000550872 DOCK8Q8NF50 2099 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 LOC730098B7Z3J9 87 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 EPHB6O15197 1021 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 CYP26A1O43174 497 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 THAP12O43422 761 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 MOSPD3O75425 235 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 MICAL2O94851 1124 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 RTN3O95197 1032 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 F11P03951 625 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 PNMA6AP0CW24 399 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 CEBPBP17676 345 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 GNA15P30679 374 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 USP46P62068 366 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 PTK2Q05397 1052 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 TEAD2Q15562 447 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 LCLAT1Q6UWP7 414 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 TTC30AQ86WT1 665 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 NPAS3Q8IXF0 933 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 FAM71AQ8IYT1 594 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 PLCD3Q8N3E9 789 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 UBA3Q8TBC4 463 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 ZSWIM1Q9BR11 485 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 IL21Q9HBE4 155 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
CHMP1A-209ENST00000550872 A0A1W2PQC6 194 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 C19orf67A6NJJ6 358 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 NRG2O14511 850 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 MED7O43513 233 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 LAMP2P13473 410 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 YWHAQP27348 245 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 SLC5A3P53794 718 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 BCAT1P54687 386 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 BPIFB4P59827 614 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 PDE4CQ08493 712 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 BST2Q10589 180 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 ARHGAP15Q53QZ3 475 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 ZDHHC14Q8IZN3 488 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 GJD3Q8N144 294 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 SCAMP5Q8TAC9 235 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 ZNF606Q8WXB4 792 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 SPAG5Q96R06 1193 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 TTLL2Q9BWV7 592 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 GPR88Q9GZN0 384 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms