RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 NFATC1O95644 943 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 TNNC2P02585 160 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 GRIK1P39086 918 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 CYP27A1Q02318 531 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 NR1H3Q13133 447 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 GAB4Q2WGN9 574 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 C2orf27AQ580R0 203 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 DPH6Q7L8W6 267 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 PDILTQ8N807 584 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 TSTD1Q8NFU3 115 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 USP33Q8TEY7 942 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 USP28Q96RU2 1077 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 EDEM2Q9BV94 578 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
RAB5C-205ENST00000550013 NME7Q9Y5B8 376 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 ZFHX4Q86UP3 3567 aa16.47■□□□□ 0.23
RAB5C-205ENST00000550013 BCLAF3A2AJT9 711 aaKnown RBP16.46■□□□□ 0.23
RAB5C-205ENST00000550013 ZNF233A6NK53 670 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 K7EQS6 105 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 LEFTY2O00292 366 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 SCAMP3O14828 347 aaKnown RBP16.46■□□□□ 0.23
RAB5C-205ENST00000550013 KCNK5O95279 499 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 CAVIN2O95810 425 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 PDCP20941 246 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 SYT1P21579 422 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 WARSP23381 471 aaKnown RBP16.46■□□□□ 0.23
RAB5C-205ENST00000550013 GBP1P32455 592 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 HOXD13P35453 343 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 DUOXA2Q1HG44 320 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 MDH1BQ5I0G3 518 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 VSTM1Q6UX27 236 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 DENND5BQ6ZUT9 1274 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 CCDC65Q8IXS2 484 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 PCED1BQ96HM7 432 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 MMS19Q96T76 1030 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 MRPL45Q9BRJ2 306 aaKnown RBP16.46■□□□□ 0.23
RAB5C-205ENST00000550013 HSPBP1Q9NZL4 362 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 TRPM5Q9NZQ8 1165 aa16.46■□□□□ 0.23
RAB5C-205ENST00000550013 F8VP50 259 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 KIAA0391O15091 583 aaKnown RBP16.45■□□□□ 0.22
RAB5C-205ENST00000550013 CYP17A1P05093 508 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 BCKDHBP21953 392 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 ANXA13P27216 316 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 PDE6CP51160 858 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 SHC2P98077 582 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 SLC39A14Q15043 492 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 ANO7Q6IWH7 933 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 PSAPL1Q6NUJ1 521 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 FILIP1Q7Z7B0 1213 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 SFTPA1Q8IWL2 248 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 CCDC33Q8N5R6 958 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 MYCBPAPQ8TBZ2 947 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 TTLL2Q9BWV7 592 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 RNF38Q9H0F5 515 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 TMEM30AQ9NV96 361 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 SMPD4Q9NXE4 827 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 CPQQ9Y646 472 aa16.45■□□□□ 0.22
RAB5C-205ENST00000550013 MYO18AQ92614 2054 aaKnown RBP16.44■□□□□ 0.22
RAB5C-205ENST00000550013 ZNF840PA6NDX5 716 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 C4orf47A7E2U8 309 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 GIPC1O14908 333 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 HNRNPLP14866 589 aaKnown RBP eCLIP16.44■□□□□ 0.22
RAB5C-205ENST00000550013 SLC6A11P48066 632 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 SLC7A9P82251 487 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 MESP2Q0VG99 397 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 SURF1Q15526 300 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
RAB5C-205ENST00000550013 USP39Q53GS9 565 aaKnown RBP16.44■□□□□ 0.22
RAB5C-205ENST00000550013 PMS2CLQ68D20 193 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 TRAPPC11Q7Z392 1133 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 RASSF3Q86WH2 238 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 WDR49Q8IV35 697 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 RDH13Q8NBN7 331 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 SNX25Q9H3E2 840 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 DPEP3Q9H4B8 488 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 MMP17Q9ULZ9 603 aa16.44■□□□□ 0.22
RAB5C-205ENST00000550013 MORC2Q9Y6X9 1032 aaPredicted RBP16.44■□□□□ 0.22
RAB5C-205ENST00000550013 GON4LQ3T8J9 2241 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 LNP1A1A4G5 178 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 PATE3B3GLJ2 98 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 TRIM66O15016 1216 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 ABL1P00519 1130 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 CST3P01034 146 aaPredicted RBP16.43■□□□□ 0.22
RAB5C-205ENST00000550013 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
RAB5C-205ENST00000550013 PFKLP17858 780 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 GNL1P36915 607 aaPredicted RBP16.43■□□□□ 0.22
RAB5C-205ENST00000550013 NOP14P78316 857 aaKnown RBP16.43■□□□□ 0.22
RAB5C-205ENST00000550013 DHCR24Q15392 516 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 TMEM92Q6UXU6 159 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 STXBP4Q6ZWJ1 553 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 HS2ST1Q7LGA3 356 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 TTC30AQ86WT1 665 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 MDGA1Q8NFP4 955 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
RAB5C-205ENST00000550013 C8orf48Q96LL4 319 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 CEP295NLQ96MC4 621 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 CFAP97Q9P2B7 532 aa16.43■□□□□ 0.22
RAB5C-205ENST00000550013 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms