RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 K7ESF4 209 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
COX6A1-203ENST00000550009 EGFP01133 1207 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
COX6A1-203ENST00000550009 FNTBP49356 437 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 SNRPFP62306 86 aaKnown RBP16.97■□□□□ 0.31
COX6A1-203ENST00000550009 CLDN10P78369 228 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 USP4Q13107 963 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 KRBA2Q6ZNG9 492 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 C4orf50Q6ZRC1 276 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 RALGPS2Q86X27 583 aaPredicted RBP16.97■□□□□ 0.31
COX6A1-203ENST00000550009 HINFPQ9BQA5 517 aa16.97■□□□□ 0.31
COX6A1-203ENST00000550009 A8MXQ7 604 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 AKAP3O75969 853 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 BEST1O76090 585 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 ZNF202O95125 648 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 CKMP06732 381 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 PXNP49023 591 aaPredicted RBP16.96■□□□□ 0.31
COX6A1-203ENST00000550009 PSMD2Q13200 908 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 MTF1Q14872 753 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 ZNF699Q32M78 642 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 ZC3H14Q6PJT7 736 aaKnown RBP16.96■□□□□ 0.31
COX6A1-203ENST00000550009 ACOT1Q86TX2 421 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 SLC9A9Q8IVB4 645 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 SFTPA1Q8IWL2 248 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 B3GALNT2Q8NCR0 500 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 SCAMP5Q8TAC9 235 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 SH3RF2Q8TEC5 729 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 WBP2Q969T9 261 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 SPATA17Q96L03 361 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 APOBEC3GQ9HC16 384 aaKnown RBP16.96■□□□□ 0.31
COX6A1-203ENST00000550009 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
COX6A1-203ENST00000550009 PCDHGA2Q9Y5H1 932 aa16.96■□□□□ 0.31
COX6A1-203ENST00000550009 ABCA7Q8IZY2 2146 aa16.96■□□□□ 0.3
COX6A1-203ENST00000550009 TRAV19A0A0A6YYK7 116 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 PDXKO00764 312 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 HRO43593 1189 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 RHOBTB3O94955 611 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 CLSTN1O94985 981 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 STAU1O95793 577 aaKnown RBP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 CCDC130P13994 396 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 DDX6P26196 483 aaKnown RBP eCLIP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 CXCL12P48061 93 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 GALK1P51570 392 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 MLLT6P55198 1093 aaPredicted RBP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 FAM160A1Q05DH4 1040 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 PPP3CAQ08209 521 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 MESP2Q0VG99 397 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 TAF10Q12962 218 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 PNOCQ13519 176 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 EML3Q32P44 896 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 ZACNQ401N2 412 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 VSTM1Q6UX27 236 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 DENND5BQ6ZUT9 1274 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 SV2AQ7L0J3 742 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 ZMIZ2Q8NF64 920 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 SYAP1Q96A49 352 aaPredicted RBP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 RMDN1Q96DB5 314 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 TTLL2Q9BWV7 592 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 MMRN2Q9H8L6 949 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 THG1LQ9NWX6 298 aaKnown RBP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 SMPD4Q9NXE4 827 aa16.95■□□□□ 0.3
COX6A1-203ENST00000550009 UXTQ9UBK9 157 aaPredicted RBP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 SMG5Q9UPR3 1016 aaKnown RBP16.95■□□□□ 0.3
COX6A1-203ENST00000550009 ZNF840PA6NDX5 716 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 ABL1P00519 1130 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 USP17L7P0C7H9 530 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 HDCP19113 662 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 GJA4P35212 333 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 PLCB2Q00722 1185 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 ZNF268Q14587 947 aaPredicted RBP16.94■□□□□ 0.3
COX6A1-203ENST00000550009 ZNF667Q5HYK9 610 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 TMEM196Q5HYL7 178 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 FAM35AQ86V20 835 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 SPEM1Q8N4L4 309 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 C12orf29Q8N999 325 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 SEMA4AQ9H3S1 761 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 ECT2Q9H8V3 914 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 VRTNQ9H8Y1 702 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 PARD6AQ9NPB6 346 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 FAM49BQ9NUQ9 324 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 DUS2Q9NX74 493 aaKnown RBP16.94■□□□□ 0.3
COX6A1-203ENST00000550009 USP25Q9UHP3 1055 aa16.94■□□□□ 0.3
COX6A1-203ENST00000550009 NUP205Q92621 2012 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 LEFTY2O00292 366 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 TGM1P22735 817 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 ANXA13P27216 316 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 ATICP31939 592 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 ASPAP45381 313 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 GCLMP48507 274 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 CCR3P51677 355 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 NDST1P52848 882 aa16.93■□□□□ 0.3
COX6A1-203ENST00000550009 GPRIN1Q7Z2K8 1008 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms