RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HHATQ5VTY9 493 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CAPRIN2Q6IMN6 1127 aaKnown RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 PPP1R21Q6ZMI0 780 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 HIPK4Q8NE63 616 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 AFG1LQ8WV93 481 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 NUDCD1Q96RS6 583 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 LRRC19Q9H756 370 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 UBN1Q9NPG3 1134 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CPSF3Q9UKF6 684 aaKnown RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 GRID1Q9ULK0 1009 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CCDC78A2IDD5 438 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 OGTO15294 1046 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 ITIH2P19823 946 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 IL9RQ01113 521 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 RAB6CQ53S08 254 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 LONP2Q86WA8 852 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CCDC77Q9BR77 488 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 MTMR12Q9C0I1 747 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 RAB6CQ9H0N0 254 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CHKBQ9Y259 395 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CFAP69A5D8W1 941 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 CDH16O75309 829 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 MTA2O94776 668 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 GM2AP17900 193 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 PHKA2P46019 1235 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 RCN2Q14257 317 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 SURF1Q15526 300 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 GJC2Q5T442 439 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ACAD10Q6JQN1 1059 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 MFSD5Q6N075 450 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 WDR49Q8IV35 697 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 SLC13A1Q9BZW2 595 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ROPN1BQ9BZX4 212 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 TRABDQ9H4I3 376 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ROPN1Q9HAT0 212 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 IFT122Q9HBG6 1241 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ARMCX1Q9P291 453 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 TNFSF13BQ9Y275 285 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 HEY1Q9Y5J3 304 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 MROH7Q68CQ1 1323 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 FAM47DPA6NHR8 397 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 FSCN2O14926 492 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 KIF1CO43896 1103 aaKnown RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 MMP3P08254 477 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 CD48P09326 243 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 PECAM1P16284 738 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 CCND1P24385 295 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 HUNKP57058 714 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 SLC1A5Q15758 541 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 RHPN2Q8IUC4 686 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 AGR3Q8TD06 166 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ARHGEF3Q9NR81 526 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 CHMP2BQ9UQN3 213 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 NEU2Q9Y3R4 380 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 INO80B-WBP1J3KQ70 363 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 OAS1P00973 400 aaKnown RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 CYP1A2P05177 515 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ACO1P21399 889 aaKnown RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ATP5DP30049 168 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ABL2P42684 1182 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 MAP2K5Q13163 448 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 AMHR2Q16671 573 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 LRRC36Q1X8D7 754 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 C17orf99Q6UX52 265 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 HACE1Q8IYU2 909 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 LRRC8CQ8TDW0 803 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 PGLYRP2Q96PD5 576 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 CEP41Q9BYV8 373 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 INO80BQ9C086 356 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 ZNF395Q9H8N7 513 aaPredicted RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 NMRK2Q9NPI5 230 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 WHRNQ9P202 907 aa11.62□□□□□ -0.55
LINC00661-204ENST00000549354 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00661-204ENST00000549354 FAM155BO75949 473 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 UNC5CO95185 931 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 FGFR1P11362 822 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 KRT4P19013 534 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 GMPRP36959 345 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 RGS7P49802 495 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 INHBEP58166 350 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 TAF1BQ53T94 588 aaPredicted RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MARCH8Q5T0T0 291 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 THEMIS2Q5TEJ8 643 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 C1orf228Q6PIY5 440 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MTHFD1LQ6UB35 978 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MTDHQ86UE4 582 aaKnown RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 ZNF677Q86XU0 584 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 UBR7Q8N806 425 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 UBA3Q8TBC4 463 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MAGEC3Q8TD91 643 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms