RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ABI2Q9NYB9 513 aaPredicted RBP9.12□□□□□ -0.95
TROAP-208ENST00000548817 CPSF3Q9UKF6 684 aaKnown RBP9.12□□□□□ -0.95
TROAP-208ENST00000548817 AGO2Q9UKV8 859 aaKnown RBP9.12□□□□□ -0.95
TROAP-208ENST00000548817 EXOC7Q9UPT5 735 aa9.12□□□□□ -0.95
TROAP-208ENST00000548817 SMC3Q9UQE7 1217 aa9.12□□□□□ -0.95
TROAP-208ENST00000548817 C2CD2Q9Y426 696 aa9.12□□□□□ -0.95
TROAP-208ENST00000548817 PCDHB5Q9Y5E4 795 aa9.12□□□□□ -0.95
TROAP-208ENST00000548817 ADAMTS9Q9P2N4 1935 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 ANK1P16157 1881 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 TRABD2BA6NFA1 517 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 AP5Z1O43299 807 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 PRPF40AO75400 957 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 DKK1O94907 266 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 IL18RAPO95256 599 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 CYP11A1P05108 521 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 NFICP08651 508 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 HAPLN1P10915 354 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 PNPLA4P41247 253 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 ZNF131P52739 623 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 GTF2BQ00403 316 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 POU5F1Q01860 360 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 PSMD2Q13200 908 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 ZNF268Q14587 947 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 HSF5Q4G112 596 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 SLC36A4Q6YBV0 504 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 ARMCX6Q7L4S7 300 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 NT5DC4Q86YG4 428 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 TMEFF1Q8IYR6 380 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 CMTM8Q8IZV2 173 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 TMEM130Q8N3G9 435 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 PNPLA1Q8N8W4 532 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 OR10T2Q8NGX3 314 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 PIP4K2CQ8TBX8 421 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 POMGNT1Q8WZA1 660 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 LARP4BQ92615 738 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 RAD54LQ92698 747 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 EZH1Q92800 747 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 KCNN1Q92952 543 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 WBP1Q96G27 269 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 ZDHHC5Q9C0B5 715 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 UPF2Q9HAU5 1272 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 UXTQ9UBK9 157 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 MAGED2Q9UNF1 606 aaPredicted RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
TROAP-208ENST00000548817 ATMQ13315 3056 aa9.11□□□□□ -0.95
TROAP-208ENST00000548817 SCN1AP35498 2009 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 TSC2P49815 1807 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 UBR5O95071 2799 aaPredicted RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 ANO9A1A5B4 782 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 KPNA7A9QM74 516 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 ANKRD63C9JTQ0 380 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 FAM189A1O60320 539 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 HUS1O60921 280 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 CBFA2T3O75081 653 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 CSH1P0DML2 217 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 CSH2P0DML3 217 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 PLCG1P19174 1290 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 ITPKAP23677 461 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 DDIT3P35638 169 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 TXLNAP40222 546 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 CDR1P51861 262 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 RPL10AP62906 217 aaKnown RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 MRPS21P82921 87 aaKnown RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 TFAMQ00059 246 aaKnown RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 MYL7Q01449 175 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 SRSF1Q07955 248 aaKnown RBP eCLIP9.1□□□□□ -0.95
TROAP-208ENST00000548817 NR1H3Q13133 447 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 ZC2HC1CQ53FD0 456 aaPredicted RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 WSCD1Q658N2 575 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 LRRC69Q6ZNQ3 347 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 BRAPQ7Z569 592 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 SLCO6A1Q86UG4 719 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 TTC9BQ8N6N2 239 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 MAB21L3Q8N8X9 362 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 TTC16Q8NEE8 873 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 NOC3LQ8WTT2 800 aaKnown RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 HVCN1Q96D96 273 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 CAMK1GQ96NX5 476 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 SLC46A2Q9BY10 475 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 SMG9Q9H0W8 520 aaKnown RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 ECT2Q9H8V3 914 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 TDP1Q9NUW8 608 aa9.1□□□□□ -0.95
TROAP-208ENST00000548817 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.1□□□□□ -0.95
TROAP-208ENST00000548817 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
TROAP-208ENST00000548817 LDHAP00338 332 aaKnown RBP9.09□□□□□ -0.95
TROAP-208ENST00000548817 ZNF883P0CG24 379 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 ARSAP15289 507 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 GAP43P17677 238 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 ATF6P18850 670 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 IFNAR2P48551 515 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms