RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 CLEC14AQ86T13 490 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 RPAINQ86UA6 219 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 PLA2G15Q8NCC3 412 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 KIF18AQ8NI77 898 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 PHOSPHO2Q8TCD6 241 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 NUP133Q8WUM0 1156 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 ARHGAP45Q92619 1136 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 GCDHQ92947 438 aaPredicted RBP4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 LPPQ93052 612 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 TEKT1Q969V4 418 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 E2F7Q96AV8 911 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 SLC7A6OSQ96CW6 309 aaPredicted RBP4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 MRPL38Q96DV4 380 aaKnown RBP4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 PAGR1Q9BTK6 254 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 HAPLN2Q9GZV7 340 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 HIPK3Q9H422 1215 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 PCIF1Q9H4Z3 704 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 SLITRK6Q9H5Y7 841 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 PIF1Q9H611 641 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 MMRN2Q9H8L6 949 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 TMEM260Q9NX78 707 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 KCMF1Q9P0J7 381 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 MTUS1Q9ULD2 1270 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 GIT1Q9Y2X7 761 aa4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 COL11A1P12107 1806 aaPredicted RBP4.79□□□□□ -1.64
TRAFD1-204ENST00000548092 ASXL3Q9C0F0 2248 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ELP1O95163 1332 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 PTPRSQ13332 1948 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 A0A0A6YYK5 440 aaPredicted RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 KIF28PB7ZC32 967 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 OVOL3O00110 214 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 IPO8O15397 1037 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CTNND1O60716 968 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 RFPL3O75679 317 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CNMDO75829 334 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 PTMAP06454 111 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 PFKMP08237 780 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ICAM3P32942 547 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 IGHMBP2P38935 993 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 MCM2P49736 904 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SLC25A3Q00325 362 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CHRNDQ07001 517 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ABHD18Q0P651 414 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TCP10Q12799 353 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SPP2Q13103 211 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TUBA3CQ13748 450 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 EPHA7Q15375 998 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ANGPT1Q15389 498 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ZNF174Q15697 407 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 PTPN21Q16825 1174 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TCEAL5Q5H9L2 206 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CRB2Q5IJ48 1285 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 PRAMEF19Q5SWL8 479 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CCDC183Q5T5S1 534 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TTC22Q5TAA0 569 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CCSAPQ6IQ19 270 aaPredicted RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TUBA3EQ6PEY2 450 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 FAM111BQ6SJ93 734 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ZNF771Q7L3S4 317 aaPredicted RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 ITPRIPQ8IWB1 547 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 RPUSD2Q8IZ73 545 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 NXPE1Q8N323 547 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 LARP4BQ92615 738 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 MRFAP1L1Q96HT8 127 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 DYDC2Q96IM9 177 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TGS1Q96RS0 853 aaKnown RBP4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 PLEKHF1Q96S99 279 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SOX7Q9BT81 388 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 TRIM8Q9BZR9 551 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 IKZF4Q9H2S9 585 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SLC2A4RGQ9NR83 387 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SMC4Q9NTJ3 1288 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 OXSMQ9NWU1 459 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 SPO11Q9Y5K1 396 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 CREBBPQ92793 2442 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 FANCMQ8IYD8 2048 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 MYH3P11055 1940 aa4.78□□□□□ -1.64
TRAFD1-204ENST00000548092 GOLGA8BA8MQT2 603 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 PRR5-ARHGAP8B1AHC4 643 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 EPB41L2O43491 1005 aaKnown RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 TBX10O75333 385 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 TOX4O94842 621 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 PRPF6O94906 941 aaKnown RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 ADCY5O95622 1261 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 CDK11BP21127 795 aaKnown RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 ARHGAP8P85298 464 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 EXOSC9Q06265 439 aaKnown RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 CHAF1AQ13111 956 aaPredicted RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 MUM1L1Q5H9M0 696 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 DNTTIP2Q5QJE6 756 aaKnown RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 ZNF627Q7L945 461 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 KRT222Q8N1A0 295 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 ZGPATQ8N5A5 531 aaKnown RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 KLHDC9Q8NEP7 349 aa4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 ZNF397Q8NF99 534 aaPredicted RBP4.77□□□□□ -1.65
TRAFD1-204ENST00000548092 NEU4Q8WWR8 484 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms