RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 LRRC3Q9BY71 257 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 STK33Q9BYT3 514 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 GPR88Q9GZN0 384 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 HESX1Q9UBX0 185 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 TSPAN16Q9UKR8 245 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 NR2E1Q9Y466 385 aa12.05□□□□□ -0.48
CALCOCO1-208ENST00000547988 FOXN3O00409 490 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 EPHB6O15197 1021 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 MED7O43513 233 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 BEST1O76090 585 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 HMGA1P17096 107 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 MAP3K7CLP57077 242 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 JAM2P57087 298 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 BPIFB4P59827 614 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 NTHL1P78549 312 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 PTK2Q05397 1052 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 CNGA2Q16280 664 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 MEA1Q16626 185 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 GOLGA7BQ2TAP0 167 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 PRSS36Q5K4E3 855 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 SDHAF4Q5VUM1 108 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 LCLAT1Q6UWP7 414 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 GET4Q7L5D6 327 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 OTOP3Q7RTS5 596 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 ADHFE1Q8IWW8 467 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 NUP93Q8N1F7 819 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 GPR152Q8TDT2 470 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 TFAP2BQ92481 460 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 KCNK16Q96T55 309 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 SMOQ99835 787 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 TTLL2Q9BWV7 592 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 COMMD8Q9NX08 183 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 MRPS23Q9Y3D9 190 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZFP37Q9Y6Q3 630 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-208ENST00000547988 TNFRSF10BO14763 440 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 CYP26A1O43174 497 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 SETSIPP0DME0 302 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 MYL4P12829 197 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 CDC25CP30307 473 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 CLCN1P35523 988 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 PBX1P40424 430 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZP2Q05996 745 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 BST2Q10589 180 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 SLC5A9Q2M3M2 681 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 CACNA2D4Q7Z3S7 1137 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 FMNL3Q8IVF7 1028 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 TDRD5Q8NAT2 981 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 STKLD1Q8NE28 680 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZNF606Q8WXB4 792 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 ACSF2Q96CM8 615 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 IQCDQ96DY2 449 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZSWIM1Q9BR11 485 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 UBXN6Q9BZV1 441 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 FBXO44Q9H4M3 255 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 IL21Q9HBE4 155 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZNF334Q9HCZ1 680 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 NLRC4Q9NPP4 1024 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 ZMYM5Q9UJ78 669 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 MYO6Q9UM54 1294 aa12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO1-208ENST00000547988 LOC730098B7Z3J9 87 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 HHLA1C9JL84 531 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 M0QYV0 167 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 THAP12O43422 761 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 PNMA6AP0CW24 399 aaPredicted RBP12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 YWHAQP27348 245 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 GABRR2P28476 465 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 SOX5P35711 763 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 CCR2P41597 374 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 STAT1P42224 750 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 PLA2G4AP47712 749 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 PPP3CCP48454 512 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 PDE6CP51160 858 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 SLC5A3P53794 718 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 MTMR3Q13615 1198 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 FIGNQ5HY92 759 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 SARM1Q6SZW1 724 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 GAREM2Q75VX8 874 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 ITFG1Q8TB96 612 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 OVCA2Q8WZ82 227 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 NUP58Q9BVL2 599 aa12.02□□□□□ -0.49
CALCOCO1-208ENST00000547988 EDEM3Q9BZQ6 932 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms