RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PTPN1P18031 435 aaKnown RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 HDCP19113 662 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 WARSP23381 471 aaKnown RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 CMA1P23946 247 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 DDX6P26196 483 aaKnown RBP eCLIP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 ANXA13P27216 316 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 CASP4P49662 377 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 MYL6P60660 151 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 SNRPFP62306 86 aaKnown RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 DMWDQ09019 674 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 STK4Q13043 487 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 BIRC3Q13489 604 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 RUNX3Q13761 415 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 LRRC32Q14392 662 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 MAPRE1Q15691 268 aaKnown RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 BMT2Q1RMZ1 405 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 CFAP221Q4G0U5 840 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 MDH1BQ5I0G3 518 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 WDR44Q5JSH3 913 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 DGKKQ5KSL6 1271 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 HEATR6Q6AI08 1181 aaKnown RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 C1orf228Q6PIY5 440 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 Q6ZS52 159 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 LIMS2Q7Z4I7 341 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 SPEM1Q8N4L4 309 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 ARL14EPQ8N8R7 260 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 FSIP1Q8NA03 581 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 GOLGA5Q8TBA6 731 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 SPATA18Q8TC71 538 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 NELL1Q92832 810 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 MYLPFQ96A32 169 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 ELMO3Q96BJ8 720 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 MSANTD3Q96H12 275 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 FUBP3Q96I24 572 aaKnown RBP eCLIP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 SPATA32Q96LK8 384 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 SLC22A12Q96S37 553 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 FAM83CQ9BQN1 747 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 FAM126AQ9BYI3 521 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 PRMT8Q9NR22 394 aaPredicted RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
SCAF11-211ENST00000547950 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
SCAF11-211ENST00000547950 PTPRZ1P23471 2315 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 C2orf78A6NCI8 922 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 SOBPA7XYQ1 873 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 CHURC1-FNTBB4DL54 471 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 KLRC4O43908 158 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 LILRB5O75023 590 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 TACC1O75410 805 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 RPN1P04843 607 aaKnown RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 USP17L7P0C7H9 530 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 TDGF1P13385 188 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 PFKFB1P16118 471 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 HOXC13P31276 330 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 MAGEA11P43364 429 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 FNTBP49356 437 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 GALK1P51570 392 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 CDH8P55286 799 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 USP46P62068 366 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 GRSF1Q12849 480 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 PSMD2Q13200 908 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 CCINQ13939 588 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 KCNB1Q14721 858 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 PDGFRLQ15198 375 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 VSTM1Q6UX27 236 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 PRR23BQ6ZRT6 265 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 C12orf56Q8IXR9 622 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 FAM160A2Q8N612 972 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 RIN3Q8TB24 985 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 MYCBPAPQ8TBZ2 947 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 SECISBP2LQ93073 1101 aaKnown RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 SYAP1Q96A49 352 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 RMDN1Q96DB5 314 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 THAP11Q96EK4 314 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 TRMT2BQ96GJ1 504 aaKnown RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 PCED1BQ96HM7 432 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 IER2Q9BTL4 223 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 LINC00597Q9H2U6 94 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 DPEP3Q9H4B8 488 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 KIF9Q9HAQ2 790 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 FBRSL1Q9HCM7 1045 aaKnown RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 HPS4Q9NQG7 708 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 PRDM9Q9NQV7 894 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 C2orf42Q9NWW7 574 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 DUS2Q9NX74 493 aaKnown RBP7.15□□□□□ -1.26
SCAF11-211ENST00000547950 TRPM5Q9NZQ8 1165 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 RAB23Q9ULC3 237 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 MAPK8IP1Q9UQF2 711 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 ZDHHC9Q9Y397 364 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 NME7Q9Y5B8 376 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 GTF3C3Q9Y5Q9 886 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 UBE4BO95155 1302 aa7.15□□□□□ -1.26
SCAF11-211ENST00000547950 USP34Q70CQ2 3546 aa7.15□□□□□ -1.27
SCAF11-211ENST00000547950 MTCL1Q9Y4B5 1905 aaKnown RBP7.15□□□□□ -1.27
SCAF11-211ENST00000547950 LRRIQ3A6PVS8 624 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-211ENST00000547950 F8VP50 259 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 CLDN5O00501 218 aa7.14□□□□□ -1.27
SCAF11-211ENST00000547950 TRIM66O15016 1216 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms