RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 MAPRE3Q9UPY8 281 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 CDYLQ9Y232 598 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 TIAM2Q8IVF5 1701 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 DOT1LQ8TEK3 1739 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 TOGARAM1Q9Y4F4 1720 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 A0A0G2JLW4 131 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 WNT10BO00744 389 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 SOCS2O14508 198 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 NEMP1O14524 444 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 ZEB2O60315 1214 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 SOAT2O75908 522 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 EBLN1P0CF75 366 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 DDCP20711 480 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 POU6F2P78424 691 aaPredicted RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 PPP3CAQ08209 521 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 BMPR2Q13873 1038 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 DHCR24Q15392 516 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 TRIP6Q15654 476 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 KIAA1161Q6NSJ0 714 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 ANKRD16Q6P6B7 361 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 TSHZ1Q6ZSZ6 1077 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 SLC29A4Q7RTT9 530 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 MRPL10Q7Z7H8 261 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 CAMKK1Q8N5S9 505 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 LEO1Q8WVC0 666 aaPredicted RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 USP7Q93009 1102 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 LDAHQ9H6V9 325 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 TOPORSQ9NS56 1045 aaPredicted RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 CTTNBP2NLQ9P2B4 639 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 EDARQ9UNE0 448 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 APOBEC2Q9Y235 224 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 RUVBL1Q9Y265 456 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 NR2E3Q9Y5X4 410 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 PIK3C2GO75747 1445 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 PPIP5K1Q6PFW1 1433 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 SPATA31E1Q6ZUB1 1445 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 ADGRA2Q96PE1 1338 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 THSD7BQ9C0I4 1608 aa3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 DICER1Q9UPY3 1922 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-204ENST00000547823 SLIT3O75094 1523 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 POLR3AO14802 1390 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 CCDC7Q96M83 1385 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 LTBP1Q14766 1721 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 CYP2D7A0A087X1C5 515 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 TCRBV7S2A1N4TA0A589 114 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM90A10PA6NDY2 464 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 GLTPD2A6NH11 291 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 TRIAP1O43715 76 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 SUN1O94901 812 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 OAZ2O95190 189 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 ANXA1P04083 346 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 ZFXP17010 805 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 BPIP17213 487 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 NDUFB7P17568 137 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 NPTX2P47972 431 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 MASP1P48740 699 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 CTXN1P60606 82 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 ATP8B2P98198 1209 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 FAPQ12884 760 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 GTF2H3Q13889 308 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 CD300EQ496F6 205 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 TAF7LQ5H9L4 462 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 GALNT16Q8N428 558 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 NSMCE1Q8WV22 266 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 ATRIPQ8WXE1 791 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 MARK4Q96L34 752 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 OSBPL9Q96SU4 736 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 SLKQ9H2G2 1235 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 IFT22Q9H7X7 185 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 SERTAD4Q9NUC0 356 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 CCNL1Q9UK58 526 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 LRP12Q9Y561 859 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 ACEP12821 1306 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 PASKQ96RG2 1323 aa3.14□□□□□ -1.91
DEPDC4-204ENST00000547823 NSD2O96028 1365 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 ROCK1Q13464 1354 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 C4BP0C0L5 1744 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 KDM6AO15550 1401 aaPredicted RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 CPSF1Q10570 1443 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 A0A0B4J269 797 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 KRT86O43790 486 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 AGFG2O95081 481 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 NR2F6P10588 404 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 CYP2D6P10635 497 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 DPEP1P16444 411 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 MPGP29372 298 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 ID4P47928 161 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 SLC6A9P48067 706 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 CCT2P78371 535 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 TUBB3Q13509 450 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM50AQ14320 339 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 KRT81Q14533 505 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 SUPT20HL1Q3ZLR7 823 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 PABPC1LQ4VXU2 614 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 AARS2Q5JTZ9 985 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 PRAMEF17Q5VTA0 474 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 SMIM5Q71RC9 77 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 KCNK18Q7Z418 384 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 STRA8Q7Z7C7 330 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms