RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TGS1Q96RS0 853 aaKnown RBP16.27■□□□□ 0.2
BRF1-212ENST00000547562 PPCSQ9HAB8 311 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 SLC40A1Q9NP59 571 aa16.27■□□□□ 0.2
BRF1-212ENST00000547562 H3BRB1 525 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 RDXP35241 583 aaKnown RBP16.27■□□□□ 0.19
BRF1-212ENST00000547562 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.19
BRF1-212ENST00000547562 MKRN3Q13064 507 aaKnown RBP16.27■□□□□ 0.19
BRF1-212ENST00000547562 LDLRAD1Q5T700 205 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 ANKRD22Q5VYY1 191 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 NAT8LQ8N9F0 302 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 PEBP4Q96S96 227 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 CALN1Q9BXU9 219 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 KATNBL1Q9H079 304 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.19
BRF1-212ENST00000547562 RSAD1Q9HA92 442 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.27■□□□□ 0.19
BRF1-212ENST00000547562 TSPAN16Q9UKR8 245 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 KIAA1257Q9ULG3 409 aa16.27■□□□□ 0.19
BRF1-212ENST00000547562 RALGAPA2Q2PPJ7 1873 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 BANF1O75531 89 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 DNAJC8O75937 253 aaPredicted RBP16.26■□□□□ 0.19
BRF1-212ENST00000547562 GPD1P21695 349 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 EPHX2P34913 555 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 ARL4CP56559 192 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 GAD2Q05329 585 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 UNC45BQ8IWX7 931 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 SUGP1Q8IWZ8 645 aaKnown RBP16.26■□□□□ 0.19
BRF1-212ENST00000547562 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 CNPY3Q9BT09 278 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 SLC24A2Q9UI40 661 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 SLC12A4Q9UP95 1085 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 C2CD4BA6NLJ0 364 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 E5RJQ4 531 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 SUN1O94901 812 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 GSTA1P08263 222 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 GPX6P59796 221 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 EIF3EP60228 445 aaKnown RBP16.26■□□□□ 0.19
BRF1-212ENST00000547562 RASA2Q15283 850 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 MARCH8Q5T0T0 291 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 SH3PXD2AQ5TCZ1 1133 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 TRNP1Q6NT89 227 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 CYP4V2Q6ZWL3 525 aaPredicted RBP16.26■□□□□ 0.19
BRF1-212ENST00000547562 ANKMY2Q8IV38 441 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 MIS12Q9H081 205 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
BRF1-212ENST00000547562 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 MCF2LO15068 1137 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PRPF4O43172 522 aaKnown RBP eCLIP16.25■□□□□ 0.19
BRF1-212ENST00000547562 ENDOD1O94919 500 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PFKMP08237 780 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 GRM5P41594 1212 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 WDR4P57081 412 aaKnown RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 IL9RQ01113 521 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 XRCC4Q13426 336 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 GRIK4Q16099 956 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 FNBP1LQ5T0N5 605 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 OR6B2Q6IFH4 312 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 FAM183BPQ6ZVS7 135 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 SPATA18Q8TC71 538 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 RXFP2Q8WXD0 754 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 TRABDQ9H4I3 376 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 ABCF3Q9NUQ8 709 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 CLUHO75153 1309 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PIK3R2O00459 728 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 RBP3P10745 1247 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PDGFRAP16234 1089 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 KRT15P19012 456 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 SLC18A1P54219 525 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 ZKSCAN8Q15776 578 aaPredicted RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 MSS51Q4VC12 460 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 EFHC2Q5JST6 749 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 SPATA21Q7Z572 469 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 ZNF410Q86VK4 478 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 C12orf29Q8N999 325 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 FAM71DQ8N9W8 422 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PYROXD1Q8WU10 500 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 PIWIL1Q96J94 861 aaKnown RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 KLC4Q9NSK0 619 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.25■□□□□ 0.19
BRF1-212ENST00000547562 HAUS2Q9NVX0 235 aa16.25■□□□□ 0.19
BRF1-212ENST00000547562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.19
BRF1-212ENST00000547562 PSMC3IPQ9P2W1 217 aaPredicted RBP16.25■□□□□ 0.19
BRF1-212ENST00000547562 E7ESA3 106 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 SMAPO00193 183 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 SPAG7O75391 227 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 CDH6P55285 790 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 MMRN1Q13201 1228 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 STILQ15468 1287 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 C15orf59Q2T9L4 293 aaPredicted RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 ATP11CQ8NB49 1132 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 MAK16Q9BXY0 300 aaKnown RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 KIF9Q9HAQ2 790 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms