RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 BPIFB1Q8TDL5 484 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 MED10Q9BTT4 135 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 NT5C1AQ9BXI3 368 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 IRF2BPLQ9H1B7 796 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 DMAP1Q9NPF5 467 aaPredicted RBP16.89■□□□□ 0.29
DDX54-204ENST00000546898 HMGXB4Q9UGU5 601 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 KANSL1LA0AUZ9 987 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CLDN5O00501 218 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CILPO75339 1184 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
DDX54-204ENST00000546898 GNA14O95837 355 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 PDE6CP51160 858 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
DDX54-204ENST00000546898 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CBWD6Q4V339 395 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CBWD3Q5JTY5 395 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CBWD5Q5RIA9 395 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 TXNDC8Q6A555 127 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 TPRG1Q6ZUI0 275 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CCDC105Q8IYK2 499 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 FUKQ8N0W3 1084 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 PJA1Q8NG27 643 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 SEMA4DQ92854 862 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 MSANTD3Q96H12 275 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 OSBPL6Q9BZF3 934 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 CLSTN2Q9H4D0 955 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDX54-204ENST00000546898 HEBP1Q9NRV9 189 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 TMEM30AQ9NV96 361 aa16.88■□□□□ 0.29
DDX54-204ENST00000546898 TRAV19A0A0A6YYK7 116 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 ARNTLO00327 626 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 MAN2B1O00754 1011 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 PMM2O15305 246 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 PI15O43692 258 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 USP17L7P0C7H9 530 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 GLULP15104 373 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 CACNA2D1P54289 1103 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 USP46P62068 366 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 C1orf228Q6PIY5 440 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 NUP93Q8N1F7 819 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 SLC2A14Q8TDB8 520 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 CSGALNACT1Q8TDX6 532 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 GBP4Q96PP9 640 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 TWNKQ96RR1 684 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 NELL2Q99435 816 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 TDP1Q9NUW8 608 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 THG1LQ9NWX6 298 aaKnown RBP16.87■□□□□ 0.29
DDX54-204ENST00000546898 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 MRPS17Q9Y2R5 130 aaKnown RBP16.87■□□□□ 0.29
DDX54-204ENST00000546898 SIT1Q9Y3P8 196 aa16.87■□□□□ 0.29
DDX54-204ENST00000546898 P4HA2O15460 535 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 LRRN2O75325 713 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 AP1G2O75843 785 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 FGFR1OPO95684 399 aaKnown RBP16.86■□□□□ 0.29
DDX54-204ENST00000546898 CCDC130P13994 396 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 CD58P19256 250 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 MAGEA9P43362 315 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 FMO5P49326 533 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
DDX54-204ENST00000546898 STX17P56962 302 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 TCF15Q12870 199 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 ORC1Q13415 861 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 ZNF852Q6ZMS4 543 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 USP13Q92995 863 aaPredicted RBP16.86■□□□□ 0.29
DDX54-204ENST00000546898 LRRC3BQ96PB8 259 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 FOXQ1Q9C009 403 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 SMG9Q9H0W8 520 aaKnown RBP16.86■□□□□ 0.29
DDX54-204ENST00000546898 CSNK1G1Q9HCP0 422 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 TRPC7Q9HCX4 862 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 LTB4R2Q9NPC1 389 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 COMMD8Q9NX08 183 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
DDX54-204ENST00000546898 CKMP06732 381 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 FAM200BP0CF97 657 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 TCF3P15923 654 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 YWHAQP27348 245 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 YWHAEP62258 255 aaKnown RBP16.85■□□□□ 0.29
DDX54-204ENST00000546898 NHLH1Q02575 133 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 CETN1Q12798 172 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 UBXN2BQ14CS0 331 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 GPIHBP1Q8IV16 184 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 C12orf29Q8N999 325 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 MLKLQ8NB16 471 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 DTWD2Q8NBA8 298 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 WHAMMQ8TF30 809 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 HNRNPABQ99729 332 aaKnown RBP16.85■□□□□ 0.29
DDX54-204ENST00000546898 NUP62CLQ9H1M0 184 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 C8orf33Q9H7E9 229 aaPredicted RBP16.85■□□□□ 0.29
DDX54-204ENST00000546898 CISHQ9NSE2 258 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 FAM49BQ9NUQ9 324 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 DLGAP2Q9P1A6 1054 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 PIAS3Q9Y6X2 628 aa16.85■□□□□ 0.29
DDX54-204ENST00000546898 PIEZO1Q92508 2521 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 FAM92AA1XBS5 289 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms