RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TMEM150AQ86TG1 271 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 NPAS3Q8IXF0 933 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 NUP93Q8N1F7 819 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 RBBP8NLQ8NC74 664 aaPredicted RBP15.33■□□□□ 0.04
DDX54-203ENST00000546869 SHKBP1Q8TBC3 707 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 GPR152Q8TDT2 470 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 OVCA2Q8WZ82 227 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 TCEAL4Q96EI5 215 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 COL25A1Q9BXS0 654 aaPredicted RBP15.33■□□□□ 0.04
DDX54-203ENST00000546869 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
DDX54-203ENST00000546869 KRT82Q9NSB4 513 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 SIK3Q9Y2K2 1263 aa15.33■□□□□ 0.04
DDX54-203ENST00000546869 UNC80Q8N2C7 3258 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 O00370 1275 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 BEST1O76090 585 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 UCHL3P15374 230 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 NPR3P17342 541 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 PFKLP17858 780 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 GABRR2P28476 465 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 ADORA2BP29275 332 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 SSTR3P32745 418 aaPredicted RBP15.32■□□□□ 0.04
DDX54-203ENST00000546869 APBA1Q02410 837 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 MTMR3Q13615 1198 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 GJB7Q6PEY0 223 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 LUZP1Q86V48 1076 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 NECAB3Q96P71 396 aaPredicted RBP15.32■□□□□ 0.04
DDX54-203ENST00000546869 STK33Q9BYT3 514 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 ATXN3LQ9H3M9 355 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 TSPY26PQ9H489 355 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 TRPV4Q9HBA0 871 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 NCANO14594 1321 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 NOTCH4Q99466 2003 aa15.32■□□□□ 0.04
DDX54-203ENST00000546869 A0A1B0GTH6 734 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 A0A1W2PRU2 124 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 CEBPBP17676 345 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 SLC8A3P57103 927 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 UBXN1Q04323 297 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 TEAD2Q15562 447 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 FILIP1LQ4L180 1135 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 PKDCCQ504Y2 493 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 ARHGAP15Q53QZ3 475 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 SNX30Q5VWJ9 437 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 POTEHQ6S545 545 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 MTSS1LQ765P7 747 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 TFAP2BQ92481 460 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 GCNAQ96QF7 691 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 LSM14BQ9BX40 385 aaKnown RBP15.31■□□□□ 0.04
DDX54-203ENST00000546869 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 TASP1Q9H6P5 420 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 HESX1Q9UBX0 185 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 LIMD1Q9UGP4 676 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 TSPAN16Q9UKR8 245 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 MAGED2Q9UNF1 606 aaPredicted RBP15.31■□□□□ 0.04
DDX54-203ENST00000546869 PTPRDP23468 1912 aa15.31■□□□□ 0.04
DDX54-203ENST00000546869 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 FOXN3O00409 490 aaPredicted RBP15.3■□□□□ 0.04
DDX54-203ENST00000546869 NRG2O14511 850 aaPredicted RBP15.3■□□□□ 0.04
DDX54-203ENST00000546869 SETSIPP0DME0 302 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 CD19P15391 556 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 YWHAQP27348 245 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 SLC5A3P53794 718 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 BCAT1P54687 386 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 BPIFB4P59827 614 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 USP46P62068 366 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 NR1I3Q14994 352 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 SYCP1Q15431 976 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 ARHGAP44Q17R89 818 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 RAB41Q5JT25 222 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 TTC30AQ86WT1 665 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 PDZD8Q8NEN9 1154 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 KCTD13Q8WZ19 329 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 MCRS1Q96EZ8 462 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 ASB16Q96NS5 453 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 SLITRK1Q96PX8 696 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 ZSWIM1Q9BR11 485 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 GANQ9H2C0 597 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 KCNK12Q9HB15 430 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX54-203ENST00000546869 USP3Q9Y6I4 520 aa15.3■□□□□ 0.04
DDX54-203ENST00000546869 TCF20Q9UGU0 1960 aaKnown RBP15.29■□□□□ 0.04
DDX54-203ENST00000546869 TNFRSF10AO00220 468 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 XPO1O14980 1071 aaKnown RBP15.29■□□□□ 0.04
DDX54-203ENST00000546869 MED7O43513 233 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 ECI2O75521 394 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 TADA3O75528 432 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 ZDHHC11BP0C7U3 371 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 KRT5P13647 590 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 SP100P23497 879 aaPredicted RBP15.29■□□□□ 0.04
DDX54-203ENST00000546869 CLCN1P35523 988 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 PLA2G4AP47712 749 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 KIF11P52732 1056 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 PTK2Q05397 1052 aa15.29■□□□□ 0.04
DDX54-203ENST00000546869 BST2Q10589 180 aaKnown RBP15.29■□□□□ 0.04
DDX54-203ENST00000546869 HTR4Q13639 388 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms