RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PNMA6AP0CW24 399 aaPredicted RBP21.69■■□□□ 1.06
HMGA2-211ENST00000545998 NPR3P17342 541 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 USP8P40818 1118 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 MAP3K7CLP57077 242 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 POLR2FP61218 127 aaKnown RBP21.69■■□□□ 1.06
HMGA2-211ENST00000545998 TAF12Q16514 161 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 PTPN21Q16825 1174 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 CYP4A22Q5TCH4 519 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 PDZD4Q76G19 769 aaPredicted RBP21.69■■□□□ 1.06
HMGA2-211ENST00000545998 ITFG1Q8TB96 612 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 TCEAL4Q96EI5 215 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 TRMT2BQ96GJ1 504 aaKnown RBP21.69■■□□□ 1.06
HMGA2-211ENST00000545998 DUSP16Q9BY84 665 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 TSPAN16Q9UKR8 245 aa21.69■■□□□ 1.06
HMGA2-211ENST00000545998 TRIOO75962 3097 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 BRD2P25440 801 aaKnown RBP21.68■■□□□ 1.06
HMGA2-211ENST00000545998 CNGA2Q16280 664 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 GOLGA7BQ2TAP0 167 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 LCLAT1Q6UWP7 414 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 DENND5BQ6ZUT9 1274 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 TTC30AQ86WT1 665 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 GAS2L3Q86XJ1 694 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 ADHFE1Q8IWW8 467 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 ANKRD52Q8NB46 1076 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 MYRFLQ96LU7 910 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 ACP6Q9NPH0 428 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 IFNKQ9P0W0 207 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 USTQ9Y2C2 406 aa21.68■■□□□ 1.06
HMGA2-211ENST00000545998 F8VZ95 297 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 ZNF197O14709 1029 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 TNFRSF10BO14763 440 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 CYP26A1O43174 497 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 MOSPD3O75425 235 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 MYL4P12829 197 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 CLCN1P35523 988 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 JAM2P57087 298 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 ZP2Q05996 745 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 STILQ15468 1287 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 GAREM2Q75VX8 874 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 GET4Q7L5D6 327 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-211ENST00000545998 IL21Q9HBE4 155 aa21.67■■□□□ 1.06
HMGA2-211ENST00000545998 MAGED2Q9UNF1 606 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-211ENST00000545998 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.67■■□□□ 1.06
HMGA2-211ENST00000545998 MRPS23Q9Y3D9 190 aaKnown RBP21.67■■□□□ 1.06
HMGA2-211ENST00000545998 HHLA1C9JL84 531 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 MICAL2O94851 1124 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 FGF19O95750 216 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 GNA15P30679 374 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 PBX1P40424 430 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 USP46P62068 366 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 PKDCCQ504Y2 493 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 NUP93Q8N1F7 819 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 RPGRIP1Q96KN7 1286 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 MYADMQ96S97 322 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 TTLL2Q9BWV7 592 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 RBSNQ9H1K0 784 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 PNPLA8Q9NP80 782 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 NLRC4Q9NPP4 1024 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.66■■□□□ 1.06
HMGA2-211ENST00000545998 NR2E1Q9Y466 385 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 ANAPC1Q9H1A4 1944 aa21.66■■□□□ 1.06
HMGA2-211ENST00000545998 LOC730098B7Z3J9 87 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 CEBPBP17676 345 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 SP100P23497 879 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-211ENST00000545998 GABRR2P28476 465 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 SLC5A3P53794 718 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 BCAT1P54687 386 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 OTOP3Q7RTS5 596 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 TMEM150AQ86TG1 271 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 SHKBP1Q8TBC3 707 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 ANP32EQ9BTT0 268 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 IL37Q9NZH6 218 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 UXTQ9UBK9 157 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-211ENST00000545998 HESX1Q9UBX0 185 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 A0A1W2PRU2 124 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 C2CD4DB7Z1M9 353 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 F11P03951 625 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 POTEHQ6S545 545 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 SLC47A2Q86VL8 602 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 NPAS3Q8IXF0 933 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 SCAMP5Q8TAC9 235 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 ZNF606Q8WXB4 792 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 ING5Q8WYH8 240 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 FGF13Q92913 245 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 UBXN6Q9BZV1 441 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 XPO4Q9C0E2 1151 aaKnown RBP21.65■■□□□ 1.06
HMGA2-211ENST00000545998 EHD2Q9NZN4 543 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 CDH7Q9ULB5 785 aa21.65■■□□□ 1.06
HMGA2-211ENST00000545998 C19orf67A6NJJ6 358 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 THAP12O43422 761 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 RTN3O95197 1032 aaPredicted RBP21.64■■□□□ 1.05
HMGA2-211ENST00000545998 GJA1P17302 382 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 CDC25CP30307 473 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 SLC8A3P57103 927 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 PTK2Q05397 1052 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 PDE4CQ08493 712 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 BST2Q10589 180 aaKnown RBP21.64■■□□□ 1.05
HMGA2-211ENST00000545998 GPRIN1Q7Z2K8 1008 aa21.64■■□□□ 1.05
HMGA2-211ENST00000545998 TDRD5Q8NAT2 981 aaKnown RBP21.64■■□□□ 1.05
HMGA2-211ENST00000545998 UBA3Q8TBC4 463 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms