RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ARHGEF15O94989 841 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 POU2F2P09086 479 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 ADORA2BP29275 332 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 ELF1P32519 619 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 PDE4CQ08493 712 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 NAA35Q5VZE5 725 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 DENND1BQ6P3S1 775 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 CCDC149Q6ZUS6 474 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 MON1BQ7L1V2 547 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 ARCQ7LC44 396 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 RHOT2Q8IXI1 618 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 PPP1R13BQ96KQ4 1090 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 KLHL5Q96PQ7 755 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 PLEKHA4Q9H4M7 779 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 MRPL47Q9HD33 250 aaKnown RBP16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 SPTLC3Q9NUV7 552 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 TMLHEQ9NVH6 421 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 ADAM22Q9P0K1 906 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 PCDHA13Q9Y5I0 950 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 CHD7Q9P2D1 2997 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 NCANO14594 1321 aa16.9■□□□□ 0.3
PRPF40A-212ENST00000545856 C2CD2LO14523 706 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 GRM6O15303 877 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 KRT86O43790 486 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 GLUD1P00367 558 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 CNPP09543 421 aaKnown RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 ERVFC1P60507 584 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 GPC5P78333 572 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 KIF5AQ12840 1032 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 ZNF268Q14587 947 aaPredicted RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 IFI16Q16666 785 aaKnown RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 RAB41Q5JT25 222 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 RSPO2Q6UXX9 243 aaPredicted RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 KIAA1328Q86T90 577 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 PALB2Q86YC2 1186 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 MCOLN2Q8IZK6 566 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 IRGQQ8WZA9 623 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 C18orf8Q96DM3 657 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 MRPL38Q96DV4 380 aaKnown RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 TMEM209Q96SK2 561 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 SYNCQ9H7C4 482 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 CNGB3Q9NQW8 809 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 ASNSD1Q9NWL6 643 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 ABI2Q9NYB9 513 aaPredicted RBP16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 FBXW11Q9UKB1 542 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 ASB3Q9Y575 518 aa16.89■□□□□ 0.3
PRPF40A-212ENST00000545856 MYO16Q9Y6X6 1858 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 ZNF263O14978 683 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 RTN3O95197 1032 aaPredicted RBP16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 GLI1P08151 1106 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 BDNFP23560 247 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 HOXA9P31269 272 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 HADHBP55084 474 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 CAMK1Q14012 370 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 MTF1Q14872 753 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 GPR153Q6NV75 609 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 LILRA6Q6PI73 481 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 PASD1Q8IV76 773 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 WDTC1Q8N5D0 677 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 RNF10Q8N5U6 811 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 C3orf20Q8ND61 904 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 ARNTL2Q8WYA1 636 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 SMOQ99835 787 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 FBXO44Q9H4M3 255 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 LRRC4Q9HBW1 653 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 MTUS1Q9ULD2 1270 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 PPP2R2CQ9Y2T4 447 aa16.89■□□□□ 0.29
PRPF40A-212ENST00000545856 MYO7AQ13402 2215 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 OR4Q2P0C623 313 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 DNAJB1P25685 340 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 GRIK1P39086 918 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 ADCY1Q08828 1119 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 PTPN20Q4JDL3 420 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 PLPP4Q5VZY2 271 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 BEND5Q7L4P6 421 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 UBA3Q8TBC4 463 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 MICAL1Q8TDZ2 1067 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 RFFLQ8WZ73 363 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 PARVAQ9NVD7 372 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 LAMA3Q16787 3333 aa16.88■□□□□ 0.29
PRPF40A-212ENST00000545856 FAM92AA1XBS5 289 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 F8VP50 259 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 CLDN5O00501 218 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 MTA2O94776 668 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 PAPLNO95428 1278 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 CYP1A2P05177 515 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 CFHP08603 1231 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 CSH1P0DML2 217 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 CSH2P0DML3 217 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 POU3F3P20264 500 aaPredicted RBP16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 CYP2F1P24903 491 aa16.87■□□□□ 0.29
PRPF40A-212ENST00000545856 KLRC2P26717 231 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms