RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PCDHB18PQ96TA0 734 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 DNAJC7Q99615 494 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 TJP2Q9UDY2 1190 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 KIAA1257Q9ULG3 409 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 MAFFQ9ULX9 164 aa17.24■□□□□ 0.35
LIMS2-217ENST00000545738 LUC7L2Q9Y383 392 aaKnown RBP17.24■□□□□ 0.35
LIMS2-217ENST00000545738 OBSL1O75147 1896 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 PDE6CP51160 858 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 NTHL1P78549 312 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 SFMBT2Q5VUG0 894 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 PMF1Q6P1K2 205 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 POTEHQ6S545 545 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 CCDC149Q6ZUS6 474 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 ZNF571Q7Z3V5 609 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-217ENST00000545738 HS6ST3Q8IZP7 471 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 SLC35F5Q8WV83 523 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 C8orf48Q96LL4 319 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 LRRC3Q9BY71 257 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 PRKD2Q9BZL6 878 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 UBE2ZQ9H832 354 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-217ENST00000545738 SFXN1Q9H9B4 322 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 ZNF334Q9HCZ1 680 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-217ENST00000545738 DMAP1Q9NPF5 467 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-217ENST00000545738 PCDHGC3Q9UN70 934 aa17.23■□□□□ 0.35
LIMS2-217ENST00000545738 KCNA5P22460 613 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 CDC25BP30305 580 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 HOXA9P31269 272 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 CCR2P41597 374 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 PRKCIP41743 596 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 TUFMP49411 452 aaKnown RBP17.22■□□□□ 0.35
LIMS2-217ENST00000545738 PGFP49763 221 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
LIMS2-217ENST00000545738 PIGZQ86VD9 579 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 TMC8Q8IU68 726 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 HAUS4Q9H6D7 363 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 ABHD10Q9NUJ1 306 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 ZDHHC7Q9NXF8 308 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 DNMT3BQ9UBC3 853 aaKnown RBP17.22■□□□□ 0.35
LIMS2-217ENST00000545738 MYO16Q9Y6X6 1858 aa17.22■□□□□ 0.35
LIMS2-217ENST00000545738 PIK3R2O00459 728 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 FERP16591 822 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
LIMS2-217ENST00000545738 RGS7P49802 495 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 SLC5A3P53794 718 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 BCAT1P54687 386 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 CDR2Q01850 454 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 TFF2Q03403 129 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 BST2Q10589 180 aaKnown RBP17.21■□□□□ 0.35
LIMS2-217ENST00000545738 TRIM14Q14142 442 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 ASIC2Q16515 512 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 SLC5A9Q2M3M2 681 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 SMYD5Q6GMV2 418 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 DENND4AQ7Z401 1863 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 DNAJB7Q7Z6W7 309 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-217ENST00000545738 DNAAF5Q86Y56 855 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 C1orf131Q8NDD1 294 aaKnown RBP17.21■□□□□ 0.35
LIMS2-217ENST00000545738 PSMG2Q969U7 264 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 ARHGAP20Q9P2F6 1191 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 DENND4CQ5VZ89 1909 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 SLC38A8A6NNN8 435 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 TRIM66O15016 1216 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 TADA3O75528 432 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 LRG1P02750 347 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 ALDH1A3P47895 512 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 BPIFB4P59827 614 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 GRASPQ7Z6J2 395 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-217ENST00000545738 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 CMASQ8NFW8 434 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-217ENST00000545738 IQCDQ96DY2 449 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 SPATA17Q96L03 361 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
LIMS2-217ENST00000545738 ANAPC1Q9H1A4 1944 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 TRIOO75962 3097 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 GRXCR2A6NFK2 248 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 XPO1O14980 1071 aaKnown RBP17.2■□□□□ 0.34
LIMS2-217ENST00000545738 NCK2O43639 380 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 HNRNPA1P09651 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIMS2-217ENST00000545738 PLA2G4AP47712 749 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 MRE11P49959 708 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 STILQ15468 1287 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 RAB41Q5JT25 222 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 GPR149Q86SP6 731 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 SMG7Q92540 1137 aaKnown RBP17.2■□□□□ 0.34
LIMS2-217ENST00000545738 NDRG1Q92597 394 aaKnown RBP17.2■□□□□ 0.34
LIMS2-217ENST00000545738 SYN2Q92777 582 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-217ENST00000545738 TCEAL4Q96EI5 215 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 CHP1Q99653 195 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 HESX1Q9UBX0 185 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 ATP8B3O60423 1300 aa17.2■□□□□ 0.34
LIMS2-217ENST00000545738 DOCK8Q8NF50 2099 aa17.19■□□□□ 0.34
LIMS2-217ENST00000545738 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
LIMS2-217ENST00000545738 AKR1B15C9JRZ8 316 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-217ENST00000545738 MED7O43513 233 aa17.19■□□□□ 0.34
LIMS2-217ENST00000545738 MOSPD3O75425 235 aa17.19■□□□□ 0.34
LIMS2-217ENST00000545738 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms