RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 FAM193AP78312 1265 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 EMC10Q5UCC4 262 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 SLFN12LQ6IEE8 588 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 SPATA2LQ8IUW3 424 aaPredicted RBP12.33□□□□□ -0.44
TMEM258-208ENST00000545210 CHCHD4Q8N4Q1 142 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 FIZ1Q96SL8 496 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 ZDHHC4Q9NPG8 344 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 PILRBQ9UKJ0 227 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
TMEM258-208ENST00000545210 BPTFQ12830 3046 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 SETXQ7Z333 2677 aaKnown RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 MYMKA6NI61 221 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 UPK3BL1B0FP48 263 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 UPK3BL2E5RIL1 263 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 LEFTY2O00292 366 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 SCAMP3O14828 347 aaKnown RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 KAT7O95251 611 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 IL18RAPO95256 599 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 ATXN3P54252 364 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 WNT7BP56706 349 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 TFAMQ00059 246 aaKnown RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 MYL7Q01449 175 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 MCM6Q14566 821 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 LMBRD2Q68DH5 695 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 OSTM1Q86WC4 334 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 PROSER1Q86XN7 944 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 ADGRG2Q8IZP9 1017 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 PGBD3Q8N328 593 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 HDDC3Q8N4P3 179 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 DEFB119Q8N690 84 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 OR2I1PQ8NGU4 316 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 SPATA18Q8TC71 538 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 POMGNT1Q8WZA1 660 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 FAM84AQ96KN4 292 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 PNKPQ96T60 521 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 POLMQ9NP87 494 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-208ENST00000545210 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
TMEM258-208ENST00000545210 MYH10P35580 1976 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 TCRBV21S2A2A0A5A6 115 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 FAM221BA6H8Z2 402 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 H0Y626 953 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 ADAM23O75077 832 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 ATP2C2O75185 946 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 TRIM16O95361 564 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 CAPNS1P04632 268 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 ADSSP30520 456 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 ABCD1P33897 745 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 PDE6CP51160 858 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 POU5F1Q01860 360 aaKnown RBP12.31□□□□□ -0.44
TMEM258-208ENST00000545210 KDSRQ06136 332 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
TMEM258-208ENST00000545210 DHCR24Q15392 516 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 RILPL1Q5EBL4 403 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 SPDYCQ5MJ68 293 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 NT5DC4Q86YG4 428 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 TMEM86AQ8N2M4 240 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 ZSWIM2Q8NEG5 633 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 CALML4Q96GE6 196 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
TMEM258-208ENST00000545210 FAM213AQ9BRX8 229 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 RNF38Q9H0F5 515 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 BLOC1S4Q9NUP1 217 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 SLC6A14Q9UN76 642 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 SNX9Q9Y5X1 595 aa12.31□□□□□ -0.44
TMEM258-208ENST00000545210 AP5Z1O43299 807 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 OPHN1O60890 802 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 SEC24BO95487 1268 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 APODP05090 189 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 SERPINF2P08697 491 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 KRT19P08727 400 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 PLCG1P19174 1290 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 PCSK1P29120 753 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 HOXD12P35452 270 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 UBA7P41226 1012 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 DPP6P42658 865 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 MAGEA11P43364 429 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 KIR2DL1P43626 348 aaPredicted RBP12.3□□□□□ -0.44
TMEM258-208ENST00000545210 LHX1P48742 406 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 USP46P62068 366 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 RPL6Q02878 288 aaKnown RBP12.3□□□□□ -0.44
TMEM258-208ENST00000545210 RESTQ13127 1097 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 BYSLQ13895 437 aaKnown RBP12.3□□□□□ -0.44
TMEM258-208ENST00000545210 DUOXA1Q1HG43 343 aa12.3□□□□□ -0.44
TMEM258-208ENST00000545210 HSF5Q4G112 596 aaPredicted RBP12.3□□□□□ -0.44
TMEM258-208ENST00000545210 PEAR1Q5VY43 1037 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms