RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FCHO1O14526 889 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 PRICKLE3O43900 615 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-207ENST00000544052 SRGAP2O75044 1071 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 INMTO95050 263 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 GPANK1O95872 356 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 LMNAP02545 664 aaKnown RBP4.34□□□□□ -1.71
SCFD1-207ENST00000544052 ITGA5P08648 1049 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 ARP10275 920 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 KCNA3P22001 575 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 SCNN1GP51170 649 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 DGKEP52429 567 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 PRKAG1P54619 331 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 CTSWP56202 376 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 HHEXQ03014 270 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.34□□□□□ -1.71
SCFD1-207ENST00000544052 CCDC70Q6NSX1 233 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 Q6ZSN1 163 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 ANKRD18AQ8IVF6 992 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 MAPKAPK5Q8IW41 473 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 SLC46A2Q9BY10 475 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 GBA2Q9HCG7 927 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-207ENST00000544052 VPS45Q9NRW7 570 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 SRP68Q9UHB9 627 aaKnown RBP4.34□□□□□ -1.71
SCFD1-207ENST00000544052 EIF2B4Q9UI10 523 aaKnown RBP4.34□□□□□ -1.71
SCFD1-207ENST00000544052 HS3ST4Q9Y661 456 aa4.34□□□□□ -1.71
SCFD1-207ENST00000544052 KIAA0556O60303 1618 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ZCCHC11Q5TAX3 1644 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 B9A039 149 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 RGS10O43665 173 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 COQ9O75208 318 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ERN1O75460 977 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 HGFP14210 728 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 IDEP14735 1019 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 KCNA2P16389 499 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 COMTP21964 271 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 NTSR1P30989 418 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 BUD31P41223 144 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 PNLIPRP1P54315 467 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 LOXL3P58215 753 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SLC5A9Q2M3M2 681 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ARHGAP40Q5TG30 622 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 FAXCQ5TGI0 409 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 VPS53Q5VIR6 699 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 CYP26C1Q6V0L0 522 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 MMS22LQ6ZRQ5 1243 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 POLNQ7Z5Q5 900 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 CIR1Q86X95 450 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ANKRD35Q8N283 1001 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 DNAJB14Q8TBM8 379 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SMCR8Q8TEV9 937 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 TMEM171Q8WVE6 324 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SSBP3Q9BWW4 388 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SLC25A32Q9H2D1 315 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 RNPEPQ9H4A4 650 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 LPAR3Q9UBY5 353 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 NDRG4Q9ULP0 352 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SORCS3Q9UPU3 1222 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 XDHP47989 1333 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 AQP7P3A6NL99 342 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 DNPH1O43598 174 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 PLATP00750 562 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 CKMT1AP12532 417 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ITGALP20701 1170 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ACO1P21399 889 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 YY1P25490 414 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 HIBADHP31937 336 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ARL4CP56559 192 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SP2Q02086 613 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SLC4A8Q2Y0W8 1093 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 B3GNTL1Q67FW5 361 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 NAIF1Q69YI7 327 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 LRRC55Q6ZSA7 311 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 HTR3DQ70Z44 454 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 MOGAT3Q86VF5 341 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 SCAMP5Q8TAC9 235 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 Q8TCH9 128 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 OTUD7AQ8TE49 926 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 RUBCNQ92622 972 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 ZBTB45Q96K62 511 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 KCNC2Q96PR1 638 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 TMEM8AQ9HCN3 771 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 GGA3Q9NZ52 723 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 TRPM5Q9NZQ8 1165 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 MAP3K2Q9Y2U5 619 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 MTO1Q9Y2Z2 717 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 CHST2Q9Y4C5 530 aa4.33□□□□□ -1.72
SCFD1-207ENST00000544052 LRRFIP2Q9Y608 721 aaKnown RBP4.33□□□□□ -1.72
SCFD1-207ENST00000544052 CARMIL1Q5VZK9 1371 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 MAP3K4Q9Y6R4 1608 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 FER1L4A9Z1Z3 1794 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 UGGT2Q9NYU1 1516 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 KDM6BO15054 1643 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 A0A0B4J269 797 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 HMX3A6NHT5 357 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 GOLGA6L6A8MZA4 724 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 AGPSO00116 658 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 PCDH17O14917 1159 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 NCAM2O15394 837 aa4.32□□□□□ -1.72
SCFD1-207ENST00000544052 RPS6KA4O75676 772 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms