RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 NPTXRO95502 500 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 GPD1P21695 349 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 PCK1P35558 622 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 TAF5Q15542 800 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 RIBC1Q8N443 379 aaPredicted RBP14.59□□□□□ -0.07
MSH2-206ENST00000543555 HSPH1Q92598 858 aa14.59□□□□□ -0.07
MSH2-206ENST00000543555 PRCCQ92733 491 aaPredicted RBP14.59□□□□□ -0.07
MSH2-206ENST00000543555 PARK7Q99497 189 aaKnown RBP14.59□□□□□ -0.07
MSH2-206ENST00000543555 E5RJQ4 531 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 TRPA1O75762 1119 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 FSBPO95073 299 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 BRAFP15056 766 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 GDF10P55107 478 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 FASTKD3Q14CZ7 662 aaKnown RBP14.58□□□□□ -0.07
MSH2-206ENST00000543555 LRRC14Q15048 493 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 CCDC121Q6ZUS5 278 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 FAM183BPQ6ZVS7 135 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 RFX6Q8HWS3 928 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 PEBP4Q96S96 227 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 CNPY3Q9BT09 278 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 CXCL16Q9H2A7 254 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 ADAMTS10Q9H324 1103 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 PLEKHA5Q9HAU0 1116 aa14.58□□□□□ -0.07
MSH2-206ENST00000543555 FARP1Q9Y4F1 1045 aaPredicted RBP14.58□□□□□ -0.07
MSH2-206ENST00000543555 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.58□□□□□ -0.07
MSH2-206ENST00000543555 MANSC4A6NHS7 340 aaPredicted RBP14.58□□□□□ -0.08
MSH2-206ENST00000543555 C2CD4BA6NLJ0 364 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 ADCY6O43306 1168 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 PFKMP08237 780 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 STILQ15468 1287 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 IQSEC1Q6DN90 963 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 OR6B2Q6IFH4 312 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 TRNP1Q6NT89 227 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 CENPUQ71F23 418 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 PIGWQ7Z7B1 504 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 PCGF5Q86SE9 256 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 C12orf29Q8N999 325 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 CCDC197Q8NCU1 140 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 MGARPQ8TDB4 240 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 DYDC1Q8WWB3 177 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 MIS12Q9H081 205 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 C10orf88Q9H8K7 445 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 KCNK9Q9NPC2 374 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 SNTG2Q9NY99 539 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 GINS2Q9Y248 185 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 DERAQ9Y315 318 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 EXOC1LA0A1B0GW35 172 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 RRN3P2A6NIE6 340 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 PIK3R2O00459 728 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 ALOX15BO15296 676 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 VIMP08670 466 aaKnown RBP14.58□□□□□ -0.08
MSH2-206ENST00000543555 HOXA11P31270 313 aaPredicted RBP14.58□□□□□ -0.08
MSH2-206ENST00000543555 CAP1Q01518 475 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 PDE4CQ08493 712 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 TMEM62Q0P6H9 643 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 GOLGA7BQ2TAP0 167 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 RXFP2Q8WXD0 754 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 PIWIL1Q96J94 861 aaKnown RBP14.58□□□□□ -0.08
MSH2-206ENST00000543555 ZMAT2Q96NC0 199 aaKnown RBP14.58□□□□□ -0.08
MSH2-206ENST00000543555 CALN1Q9BXU9 219 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 OSBPL7Q9BZF2 842 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 FAM49AQ9H0Q0 323 aaPredicted RBP14.58□□□□□ -0.08
MSH2-206ENST00000543555 ACTL7BQ9Y614 415 aa14.58□□□□□ -0.08
MSH2-206ENST00000543555 APOC4-APOC2K7ER74 178 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 APOC2P02655 101 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 CTCFP49711 727 aaPredicted RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 TTC31Q49AM3 519 aaPredicted RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 SH3PXD2AQ5TCZ1 1133 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 SLC27A1Q6PCB7 646 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 APBB1IPQ7Z5R6 666 aaPredicted RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 PLEKHH3Q7Z736 793 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 ANKRD42Q8N9B4 389 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 RSAD2Q8WXG1 361 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 SNX27Q96L92 541 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 GCOM2Q9BZD3 368 aaPredicted RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 RSAD1Q9HA92 442 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 CAPN7Q9Y6W3 813 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 PDGFRAP16234 1089 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 GCAP28676 217 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 CTGFP29279 349 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 APLP1P51693 650 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 MPP2Q14168 576 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 HP1BP3Q5SSJ5 553 aaPredicted RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 PRAMEF19Q5SWL8 479 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 CYP4V2Q6ZWL3 525 aaPredicted RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 CATSPER4Q7RTX7 472 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 PACS2Q86VP3 889 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 PPIL6Q8IXY8 311 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 NPLOC4Q8TAT6 608 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 MAML1Q92585 1016 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 MRPL45Q9BRJ2 306 aaKnown RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 NSRP1Q9H0G5 558 aaKnown RBP14.57□□□□□ -0.08
MSH2-206ENST00000543555 SNX9Q9Y5X1 595 aa14.57□□□□□ -0.08
MSH2-206ENST00000543555 PPEF2O14830 753 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 ENDOD1O94919 500 aa14.56□□□□□ -0.08
MSH2-206ENST00000543555 RPL22P35268 128 aaKnown RBP14.56□□□□□ -0.08
MSH2-206ENST00000543555 EIF3EP60228 445 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms