RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 HHIPQ96QV1 700 aa9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 MMS19Q96T76 1030 aa9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 TTLL2Q9BWV7 592 aa9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 TRIM9Q9C026 710 aa9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 LINC00597Q9H2U6 94 aa9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 POLR3BQ9NW08 1133 aaPredicted RBP9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 TRPM5Q9NZQ8 1165 aa9.54□□□□□ -0.88
AP003108.2-208ENST00000543044 TCHHQ07283 1943 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 ZNF840PA6NDX5 716 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 SPTLC2O15270 562 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 TGFB1I1O43294 461 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 STX6O43752 255 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 RHOBTB1O94844 696 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 CST3P01034 146 aaPredicted RBP9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 DLATP10515 647 aaKnown RBP9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 TNNI1P19237 187 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 GNL1P36915 607 aaPredicted RBP9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 MPLP40238 635 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 USP46P62068 366 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 SLC7A9P82251 487 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 ZXDBP98169 803 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 PSMD2Q13200 908 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 PSMD6Q15008 389 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 ELF2Q15723 593 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 CCDC6Q16204 474 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 SNRNP35Q16560 246 aaKnown RBP9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 STPG1Q5TH74 334 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 IQUBQ8NA54 791 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 FNBP1Q96RU3 617 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 DUSP15Q9H1R2 295 aaPredicted RBP9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 VPS45Q9NRW7 570 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 AGPAT3Q9NRZ7 376 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 RXFP3Q9NSD7 469 aa9.53□□□□□ -0.88
AP003108.2-208ENST00000543044 F8VP50 259 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 K7EQS6 105 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 LEFTY2O00292 366 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 SLC9A3R1O14745 358 aaPredicted RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 STAU1O95793 577 aaKnown RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 OLFM2O95897 454 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 PTPN1P18031 435 aaKnown RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 OPRD1P41143 372 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 TNNC1P63316 161 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 ASIC1P78348 528 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 CYP24A1Q07973 514 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 WDR72Q3MJ13 1102 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 USP39Q53GS9 565 aaKnown RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 MDH1BQ5I0G3 518 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 FAM26FQ5R3K3 315 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 TDRD10Q5VZ19 366 aaKnown RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 HS2ST1Q7LGA3 356 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 C11orf74Q86VG3 221 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 ADGRG2Q8IZP9 1017 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 XXYLT1Q8NBI6 393 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 RDH13Q8NBN7 331 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 TSTD1Q8NFU3 115 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 OR6B3Q8NGW1 331 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 DHX58Q96C10 678 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 ZNF396Q96N95 335 aaPredicted RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 SLITRK1Q96PX8 696 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 CGRRF1Q99675 332 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 C7orf25Q9BPX7 421 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 ELOVL4Q9GZR5 314 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 RNF38Q9H0F5 515 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 MAGEF1Q9HAY2 307 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 CGNQ9P2M7 1197 aaKnown RBP9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 DENND4CQ5VZ89 1909 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 UBE4BO95155 1302 aa9.52□□□□□ -0.89
AP003108.2-208ENST00000543044 CACNA1BQ00975 2339 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 BCLAF3A2AJT9 711 aaKnown RBP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 DCLK1O15075 740 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 CLIC2O15247 247 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 CUTAO60888 179 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 YEATS4O95619 227 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 CAVIN2O95810 425 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 OAS1P00973 400 aaKnown RBP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 ATICP31939 592 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 EIF2DP41214 584 aaKnown RBP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 CYP2J2P51589 502 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 DGKEP52429 567 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 MRPS21P82921 87 aaKnown RBP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 EHHADHQ08426 723 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 TAF10Q12962 218 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 TRPC3Q13507 836 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 GAB4Q2WGN9 574 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 C2orf27AQ580R0 203 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 SHC4Q6S5L8 630 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 UNC13DQ70J99 1090 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 FILIP1Q7Z7B0 1213 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 RASSF3Q86WH2 238 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 DDX42Q86XP3 938 aaKnown RBP eCLIP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 C12orf56Q8IXR9 622 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 B3GALNT2Q8NCR0 500 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 SCFD1Q8WVM8 642 aa9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 SYAP1Q96A49 352 aaPredicted RBP9.51□□□□□ -0.89
AP003108.2-208ENST00000543044 CCDC127Q96BQ5 260 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms