RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ARID5BQ14865 1188 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 GOLGA7BQ2TAP0 167 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
DDX55-210ENST00000543016 PKDCCQ504Y2 493 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 CYP4A22Q5TCH4 519 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 PPP1R2P3Q6NXS1 205 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 EP400NLQ6ZTU2 488 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 DENND5BQ6ZUT9 1274 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 DNAJB7Q7Z6W7 309 aaPredicted RBP12.88□□□□□ -0.35
DDX55-210ENST00000543016 SLC47A2Q86VL8 602 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 CNGA4Q8IV77 575 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 NUP93Q8N1F7 819 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 SMRP1Q8NCR6 262 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 PPM1EQ8WY54 764 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 KCTD13Q8WZ19 329 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
DDX55-210ENST00000543016 ZNF707Q96C28 371 aaPredicted RBP12.88□□□□□ -0.35
DDX55-210ENST00000543016 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
DDX55-210ENST00000543016 HSFY1Q96LI6 401 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
DDX55-210ENST00000543016 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 ATF6P18850 670 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 KCNA5P22460 613 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
DDX55-210ENST00000543016 CASP14P31944 242 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 ACADSBP45954 432 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 MRE11P49959 708 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 MAP3K7CLP57077 242 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
DDX55-210ENST00000543016 CDR2Q01850 454 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 DLX2Q07687 328 aaPredicted RBP12.87□□□□□ -0.35
DDX55-210ENST00000543016 SMAD4Q13485 552 aaKnown RBP12.87□□□□□ -0.35
DDX55-210ENST00000543016 ASIC2Q16515 512 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 DDR2Q16832 855 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 CCDC142Q17RM4 750 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
DDX55-210ENST00000543016 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 TTC30AQ86WT1 665 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 TTC9BQ8N6N2 239 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 EPS8L1Q8TE68 723 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 SMOQ99835 787 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 ZSWIM1Q9BR11 485 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 MIS12Q9H081 205 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 GRPEL1Q9HAV7 217 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 ASAH2Q9NR71 780 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
DDX55-210ENST00000543016 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 IMPACTQ9P2X3 320 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 NCANO14594 1321 aa12.87□□□□□ -0.35
DDX55-210ENST00000543016 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 M0QYV0 167 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 HAX1O00165 279 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 CCL16O15467 120 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 ADCY5O95622 1261 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 CDC25CP30307 473 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 GPD2P43304 727 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 RPL34P49207 117 aaKnown RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 PDE4CQ08493 712 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 TBX2Q13207 712 aaPredicted RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 TMC5Q6UXY8 1006 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 PIGZQ86VD9 579 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 VPS36Q86VN1 386 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 SCML4Q8N228 414 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 C12orf76Q8N812 135 aaPredicted RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 MSANTD4Q8NCY6 345 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 PDZD8Q8NEN9 1154 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 OVCA2Q8WZ82 227 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 DDX1Q92499 740 aaKnown RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 SUSD6Q92537 303 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 LRRC4Q9HBW1 653 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 NOCTQ9UK39 431 aaKnown RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 ZFP37Q9Y6Q3 630 aaPredicted RBP12.86□□□□□ -0.35
DDX55-210ENST00000543016 PLXNA3P51805 1871 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 CLUHO75153 1309 aa12.86□□□□□ -0.35
DDX55-210ENST00000543016 FAM92AA1XBS5 289 aa12.85□□□□□ -0.35
DDX55-210ENST00000543016 AKR1B15C9JRZ8 316 aaPredicted RBP12.85□□□□□ -0.35
DDX55-210ENST00000543016 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
DDX55-210ENST00000543016 SART1O43290 800 aaKnown RBP12.85□□□□□ -0.35
DDX55-210ENST00000543016 SOAT2O75908 522 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms