RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 HNRNPH3P31942 346 aaKnown RBP22■■□□□ 1.11
OTUB1-211ENST00000543004 GPD2P43304 727 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 PPM1LQ5SGD2 360 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 TMEM184AQ6ZMB5 413 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 CCDC149Q6ZUS6 474 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 GPRIN1Q7Z2K8 1008 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 CASP10Q92851 521 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 CHP1Q99653 195 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 AGPAT1Q99943 283 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 DMAP1Q9NPF5 467 aaPredicted RBP22■■□□□ 1.11
OTUB1-211ENST00000543004 ARHGAP20Q9P2F6 1191 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 MAFFQ9ULX9 164 aa22■■□□□ 1.11
OTUB1-211ENST00000543004 SPDYE4A6NLX3 237 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 HHLA1C9JL84 531 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 PIK3R2O00459 728 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 ALDH1A3P47895 512 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 BCAT1P54687 386 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 BST2Q10589 180 aaKnown RBP21.99■■□□□ 1.11
OTUB1-211ENST00000543004 STILQ15468 1287 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 TDRD12Q587J7 1177 aaKnown RBP21.99■■□□□ 1.11
OTUB1-211ENST00000543004 PMF1Q6P1K2 205 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 TMC5Q6UXY8 1006 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 C8orf48Q96LL4 319 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 PDCL3Q9H2J4 239 aa21.99■■□□□ 1.11
OTUB1-211ENST00000543004 CCDC195A0A1B0GUA6 201 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 GABBR2O75899 941 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 LRG1P02750 347 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 CCDC172P0C7W6 258 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 RGS7P49802 495 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 USP46P62068 366 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 COL19A1Q14993 1142 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 SYCE2Q6PIF2 218 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 PIGZQ86VD9 579 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 C1orf131Q8NDD1 294 aaKnown RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 HDAC7Q8WUI4 952 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 SLC35F5Q8WV83 523 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 SEPT11Q9NVA2 429 aaKnown RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 HCFC1R1Q9NWW0 138 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 IMPACTQ9P2X3 320 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 MYO16Q9Y6X6 1858 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 NOTCH4Q99466 2003 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 TRIM66O15016 1216 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 SERPING1P05155 500 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 RPL10AP62906 217 aaKnown RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 IFRD2Q12894 506 aaPredicted RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 RARS2Q5T160 578 aaKnown RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 ANKRD54Q6NXT1 300 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 ZNF677Q86XU0 584 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 SCAMP5Q8TAC9 235 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 ZNF707Q96C28 371 aaPredicted RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 PABPC5Q96DU9 382 aaKnown RBP21.98■■□□□ 1.11
OTUB1-211ENST00000543004 TJP2Q9UDY2 1190 aa21.98■■□□□ 1.11
OTUB1-211ENST00000543004 TNFRSF10BO14763 440 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 XPO1O14980 1071 aaKnown RBP21.97■■□□□ 1.11
OTUB1-211ENST00000543004 ANXA13P27216 316 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 SKIV2LQ15477 1246 aaKnown RBP21.97■■□□□ 1.11
OTUB1-211ENST00000543004 CLUL1Q15846 466 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 MEA1Q16626 185 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 CCDC186Q7Z3E2 898 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 DNAAF5Q86Y56 855 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 FMNL3Q8IVF7 1028 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 CPA5Q8WXQ8 436 aa21.97■■□□□ 1.11
OTUB1-211ENST00000543004 SLC38A8A6NNN8 435 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 SETSIPP0DME0 302 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 SLC5A3P53794 718 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 EPHB3P54753 998 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 NAA35Q5VZE5 725 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 HS6ST3Q8IZP7 471 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 SPATA17Q96L03 361 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 LHX5Q9H2C1 402 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 SFXN1Q9H9B4 322 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 DZANK1Q9NVP4 752 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 ZDHHC7Q9NXF8 308 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 DPP7Q9UHL4 492 aa21.96■■□□□ 1.11
OTUB1-211ENST00000543004 MAGED2Q9UNF1 606 aaPredicted RBP21.96■■□□□ 1.11
OTUB1-211ENST00000543004 DDX3XO00571 662 aaKnown RBP eCLIP21.95■■□□□ 1.11e-11■■■■□ 22.1
OTUB1-211ENST00000543004 NRG2O14511 850 aaPredicted RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 CYP1A1P04798 512 aaPredicted RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 HMGA1P17096 107 aaKnown RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 TNFAIP3P21580 790 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 EIF4A3P38919 411 aaKnown RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 PLA2G4AP47712 749 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 NOMO3P69849 1222 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 TSR1Q2NL82 804 aaKnown RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 C2CD6Q53TS8 623 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 DNAJB7Q7Z6W7 309 aaPredicted RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 SLC30A5Q8TAD4 765 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 PRKD2Q9BZL6 878 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 ZNF334Q9HCZ1 680 aaPredicted RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 ST7Q9NRC1 585 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 ZNHIT6Q9NWK9 470 aaKnown RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 TAS2R14Q9NYV8 317 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 OBSL1O75147 1896 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 UNC80Q8N2C7 3258 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 H3BQ06 376 aaPredicted RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 CDH5P33151 784 aaPredicted RBP21.95■■□□□ 1.1
OTUB1-211ENST00000543004 SLC8A3P57103 927 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 NTHL1P78549 312 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 PDCLQ13371 301 aa21.95■■□□□ 1.1
OTUB1-211ENST00000543004 DENND5BQ6ZUT9 1274 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms