RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 EVLQ9UI08 416 aaPredicted RBP19.08■□□□□ 0.64
CLSTN3-214ENST00000542663 ITGA11Q9UKX5 1188 aa19.08■□□□□ 0.64
CLSTN3-214ENST00000542663 NBEAQ8NFP9 2946 aa19.08■□□□□ 0.64
CLSTN3-214ENST00000542663 PKD1L2Q7Z442 2459 aa19.08■□□□□ 0.64
CLSTN3-214ENST00000542663 MYH10P35580 1976 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 LEFTY2O00292 366 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 LMO2P25791 158 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 PCSK1P29120 753 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 CASP5P51878 434 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 UAP1L1Q3KQV9 507 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 L1TD1Q5T7N2 865 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 ADGRG2Q8IZP9 1017 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 ALLCQ8N6M5 410 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 KBTBD7Q8WVZ9 684 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 RLN3Q8WXF3 142 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 DNAJC19Q96DA6 116 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 EPSTI1Q96J88 318 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 SPATA17Q96L03 361 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 FNBP1Q96RU3 617 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 MTMR12Q9C0I1 747 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 RNF38Q9H0F5 515 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 MRPL44Q9H9J2 332 aaKnown RBP19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 PDE11AQ9HCR9 933 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 CRTAC1Q9NQ79 661 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 TMEM74BQ9NUR3 256 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 RBAKQ9NYW8 714 aaPredicted RBP19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 TBC1D7Q9P0N9 293 aa19.07■□□□□ 0.64
CLSTN3-214ENST00000542663 GOLGA8IPA6NC78 632 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 TMEM8BA6NDV4 472 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 GOLGA8JA6NMD2 632 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 TULP1O00294 542 aaPredicted RBP19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 KRT19P08727 400 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 P2RY2P41231 377 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 SLC6A11P48066 632 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 PSMC1P62191 440 aaKnown RBP19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 MRPS21P82921 87 aaKnown RBP19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 TRIM61Q5EBN2 209 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 FILIP1Q7Z7B0 1213 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 TTC30AQ86WT1 665 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 IL17RCQ8NAC3 791 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 MYLPFQ96A32 169 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 ACCSQ96QU6 501 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 SYT15Q9BQS2 421 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 MBD1Q9UIS9 605 aaPredicted RBP19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 CACNA1EQ15878 2313 aa19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 DSPP15924 2871 aaKnown RBP19.06■□□□□ 0.64
CLSTN3-214ENST00000542663 PTPRJQ12913 1337 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 MYMKA6NI61 221 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 SRRM3A6NNA2 597 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 SGK1O00141 431 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 CD2BP2O95400 341 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 OLFM2O95897 454 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 LDHAP00338 332 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 PFKLP17858 780 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 GARTP22102 1010 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 BDNFP23560 247 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 PTGER3P43115 390 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 SLC7A9P82251 487 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 RBP5P82980 135 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 SF3A1Q15459 793 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 EMC10Q5UCC4 262 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 LMBRD2Q68DH5 695 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 VSTM1Q6UX27 236 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 C4orf50Q6ZRC1 276 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 C12orf40Q86WS4 652 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 TMEFF1Q8IYR6 380 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 TXNDC5Q8NBS9 432 aaKnown RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 TMX3Q96JJ7 454 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 CBWD1Q9BRT8 395 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 TTLL2Q9BWV7 592 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 FGFBP2Q9BYJ0 223 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 MAGEC2Q9UBF1 373 aaPredicted RBP19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 SEL1LQ9UBV2 794 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 EXOC7Q9UPT5 735 aa19.05■□□□□ 0.64
CLSTN3-214ENST00000542663 ADAMTS20P59510 1910 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 TNFRSF10BO14763 440 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 SCAMP3O14828 347 aaKnown RBP19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 ADAM23O75077 832 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 KLF8O95600 359 aaPredicted RBP19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 BMP15O95972 392 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 PDE6CP51160 858 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 DHCR24Q15392 516 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 KIAA1211LQ6NV74 962 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 DENND5BQ6ZUT9 1274 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 ARMCX6Q7L4S7 300 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 DPH6Q7L8W6 267 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 PNKPQ96T60 521 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 ZDHHC4Q9NPG8 344 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 TRPM5Q9NZQ8 1165 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 CDH9Q9ULB4 789 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 NME7Q9Y5B8 376 aa19.04■□□□□ 0.64
CLSTN3-214ENST00000542663 FREM2Q5SZK8 3169 aa19.03■□□□□ 0.64
CLSTN3-214ENST00000542663 A0A0A0MRY4 1105 aa19.03■□□□□ 0.64
CLSTN3-214ENST00000542663 ZNF840PA6NDX5 716 aa19.03■□□□□ 0.64
CLSTN3-214ENST00000542663 HYAL3O43820 417 aaPredicted RBP19.03■□□□□ 0.64
CLSTN3-214ENST00000542663 ALDH1A2O94788 518 aa19.03■□□□□ 0.64
CLSTN3-214ENST00000542663 KAT7O95251 611 aa19.03■□□□□ 0.64
CLSTN3-214ENST00000542663 GCNT3O95395 438 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms