RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 MLF2Q15773 248 aaPredicted RBP16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 WDR44Q5JSH3 913 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 TRIM59Q8IWR1 403 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 TTC39CQ8N584 583 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 MAB21L3Q8N8X9 362 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 MLKLQ8NB16 471 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 SLC2A14Q8TDB8 520 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 IRF7Q92985 503 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 SMARCD1Q96GM5 515 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 SHDQ96IW2 340 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 KCNK16Q96T55 309 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 PRRX2Q99811 253 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 NT5C1AQ9BXI3 368 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 SRRTQ9BXP5 876 aaKnown RBP16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 BRD9Q9H8M2 597 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 CSNK1G1Q9HCP0 422 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 IL37Q9NZH6 218 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 MYO15AQ9UKN7 3530 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 PATJQ8NI35 1801 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 ZNF263O14978 683 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 CHADO15335 359 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 CCDC130P13994 396 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 CD58P19256 250 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 ZNF268Q14587 947 aaPredicted RBP16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 NUP93Q8N1F7 819 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 CELF5Q8N6W0 485 aaKnown RBP16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 ZMIZ2Q8NF64 920 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 PRSS33Q8NF86 280 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 USP13Q92995 863 aaPredicted RBP16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 SLC22A12Q96S37 553 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 HNRNPABQ99729 332 aaKnown RBP16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 SMOQ99835 787 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 ARID3AQ99856 593 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 MED10Q9BTT4 135 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 SMG9Q9H0W8 520 aaKnown RBP16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 NUP62CLQ9H1M0 184 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 TDP1Q9NUW8 608 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 GCNT4Q9P109 453 aa16.4■□□□□ 0.22
ECHDC2-223ENST00000542552 F5P12259 2224 aa16.39■□□□□ 0.22
ECHDC2-223ENST00000542552 KANSL1LA0AUZ9 987 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 ZNF840PA6NDX5 716 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 DPYSL4O14531 572 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 P4HA2O15460 535 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 AP1G2O75843 785 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 BEST1O76090 585 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 AVPR1AP37288 418 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 PPP3CCP48454 512 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 MLLT6P55198 1093 aaPredicted RBP16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 ARHGAP29Q52LW3 1261 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 LMO3Q8TAP4 145 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 CYFIP2Q96F07 1278 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 HEBP1Q9NRV9 189 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 KRT82Q9NSB4 513 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 FAM49BQ9NUQ9 324 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 DLGAP2Q9P1A6 1054 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 CCL26Q9Y258 94 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 VPS13AQ96RL7 3174 aa16.39■□□□□ 0.21
ECHDC2-223ENST00000542552 MYH10P35580 1976 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 C2orf78A6NCI8 922 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 STK25O00506 426 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 GLULP15104 373 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 PFKLP17858 780 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 RAD23BP54727 409 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 TCF15Q12870 199 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 TAF10Q12962 218 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 CUL2Q13617 745 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 YAF2Q8IY57 180 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 UBR7Q8N806 425 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 SLC4A11Q8NBS3 891 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 PJA1Q8NG27 643 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 RIN3Q8TB24 985 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 GPT2Q8TD30 523 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 CYP2S1Q96SQ9 504 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 OSBPL6Q9BZF3 934 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 FOXQ1Q9C009 403 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 KIF9Q9HAQ2 790 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 COMMD8Q9NX08 183 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 TRPM5Q9NZQ8 1165 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 SIT1Q9Y3P8 196 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 HELZP42694 1942 aaKnown RBP16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 MIA3Q5JRA6 1907 aa16.38■□□□□ 0.21
ECHDC2-223ENST00000542552 TRAV19A0A0A6YYK7 116 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 OLFM2O95897 454 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 USP17L7P0C7H9 530 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 FAM200BP0CF97 657 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 TRIM21P19474 475 aaKnown RBP16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 YWHAQP27348 245 aa16.37■□□□□ 0.21
ECHDC2-223ENST00000542552 SLC5A3P53794 718 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms