RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 PHBP35232 272 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 SEC24CP53992 1094 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 INHBEP58166 350 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 OSTNP61366 133 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 KYNUQ16719 465 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ZFYVE27Q5T4F4 411 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 CYP4A22Q5TCH4 519 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ALKAL1Q6UXT8 129 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 DPP9Q86TI2 863 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 TMEM110Q86TL2 294 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 SESTD1Q86VW0 696 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 JOSD2Q8TAC2 188 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 BRI3BPQ8WY22 251 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 PRCCQ92733 491 aaPredicted RBP10.34□□□□□ -0.75
SS18-205ENST00000542420 RTP4Q96DX8 246 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ZNF560Q96MR9 790 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 DDX23Q9BUQ8 820 aaKnown RBP10.34□□□□□ -0.75
SS18-205ENST00000542420 SMG5Q9UPR3 1016 aaKnown RBP10.34□□□□□ -0.75
SS18-205ENST00000542420 MCF2LO15068 1137 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 MDM4O15151 490 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 PRPF4O43172 522 aaKnown RBP eCLIP10.34□□□□□ -0.75
SS18-205ENST00000542420 GJB6O95452 261 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 GJB1P08034 283 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 KRT10P13645 584 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 PTPN9P43378 593 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ACADSBP45954 432 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 NDST1P52848 882 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ARL4CP56559 192 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 IGBP1P78318 339 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 IFI35P80217 286 aaPredicted RBP10.34□□□□□ -0.75
SS18-205ENST00000542420 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 RGS9BPQ6ZS82 235 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 CCDC121Q6ZUS5 278 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 LIMS2Q7Z4I7 341 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 NME8Q8N427 588 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 CCDC197Q8NCU1 140 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 KIF12Q96FN5 646 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 CABS1Q96KC9 395 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 HEXIM2Q96MH2 286 aaKnown RBP10.34□□□□□ -0.75
SS18-205ENST00000542420 TWNKQ96RR1 684 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 GTF2IRD1Q9UHL9 959 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 ZMYND8Q9ULU4 1186 aaPredicted RBP10.34□□□□□ -0.75
SS18-205ENST00000542420 USP18Q9UMW8 372 aa10.34□□□□□ -0.75
SS18-205ENST00000542420 GOLGA6L7A0A1B0GV03 622 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 PI4K2BG5E9Z4 385 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 HAS3O00219 553 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 GPR32O75388 356 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ACSL3O95573 720 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 VTNP04004 478 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 RPLP2P05387 115 aaKnown RBP10.33□□□□□ -0.76
SS18-205ENST00000542420 KCNE1P15382 129 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 MIPP30301 263 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 GJC1P36383 396 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 RAP1GAPP47736 663 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 OTUD4Q01804 1114 aaKnown RBP10.33□□□□□ -0.76
SS18-205ENST00000542420 GPS1Q13098 491 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 NOMO1Q15155 1222 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ATP13A4Q4VNC1 1196 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ACTL9Q8TC94 416 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 CKAP2Q8WWK9 683 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 FAF2Q96CS3 445 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 CPB2Q96IY4 423 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 KATNAL1Q9BW62 490 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 GDAP2Q9NXN4 497 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 SAMD15Q9P1V8 674 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 TSPAN16Q9UKR8 245 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 FAM170AA1A519 330 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 GOLGA8SH3BPF8 625 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 CST8O60676 142 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 FAM155BO75949 473 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 GSTA2P09210 222 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ZNF286BP0CG31 522 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 DARSP14868 501 aaKnown RBP10.33□□□□□ -0.76
SS18-205ENST00000542420 TCF4P15884 667 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ZFXP17010 805 aaPredicted RBP10.33□□□□□ -0.76
SS18-205ENST00000542420 IL1R2P27930 398 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 MAGEA6P43360 314 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 CDH8P55286 799 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ADAM17P78536 824 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 LONRF1Q17RB8 773 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 KLHL38Q2WGJ6 581 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 MORN1Q5T089 497 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
SS18-205ENST00000542420 DAB2IPQ5VWQ8 1189 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 SPRYD7Q5W111 196 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 KAZNQ674X7 775 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 OLFML2BQ68BL8 750 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 VSTM1Q6UX27 236 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 PSTKQ8IV42 348 aaKnown RBP10.33□□□□□ -0.76
SS18-205ENST00000542420 CRYBG2Q8N1P7 616 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 MICALL1Q8N3F8 863 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 NAT8LQ8N9F0 302 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 ATP11CQ8NB49 1132 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 KCTD6Q8NC69 237 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 RSAD2Q8WXG1 361 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 MAML1Q92585 1016 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 APBB2Q92870 758 aa10.33□□□□□ -0.76
SS18-205ENST00000542420 MAGEB18Q96M61 343 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms