RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RASAL1O95294 804 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 MYL3P08590 195 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 PARP1P09874 1014 aaKnown RBP3.88□□□□□ -1.79
USP28-210ENST00000542033 PLA2G5P39877 138 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 PIK3CBP42338 1070 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 CARSP49589 748 aaKnown RBP3.88□□□□□ -1.79
USP28-210ENST00000542033 PDE6CP51160 858 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 DGKEP52429 567 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 SLC29A2Q14542 456 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 ZNF169Q14929 603 aaPredicted RBP3.88□□□□□ -1.79
USP28-210ENST00000542033 TXNRD1Q16881 649 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 GRAMD1BQ3KR37 738 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 PRR16Q569H4 304 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 PLAC9Q5JTB6 97 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 C10orf62Q5T681 223 aaPredicted RBP3.88□□□□□ -1.79
USP28-210ENST00000542033 ZNF618Q5T7W0 954 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 ZDHHC24Q6UX98 284 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 UNC13DQ70J99 1090 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 MORC1Q86VD1 984 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 CCDC33Q8N5R6 958 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 NELL1Q92832 810 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 GJA10Q969M2 543 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 PPP2R3CQ969Q6 453 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 PBKQ96KB5 322 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 TBCBQ99426 244 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 BRIP1Q9BX63 1249 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 CXorf36Q9H7Y0 433 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
USP28-210ENST00000542033 TLK1Q9UKI8 766 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 TBC1D30Q9Y2I9 924 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 ADGRA2Q96PE1 1338 aa3.88□□□□□ -1.79
USP28-210ENST00000542033 POM121BA6NF01 834 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ADM5C9JUS6 153 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 RAB27BO00194 218 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 KIAA0355O15063 1070 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 SLC16A3O15427 465 aaKnown RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 CCP110O43303 1012 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 THAP12O43422 761 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 TTLL1O95922 423 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 MT-ND5P03915 603 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 PDHA1P08559 390 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 NR2F6P10588 404 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 TXNP10599 105 aaKnown RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 SLC5A1P13866 664 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ZFXP17010 805 aaPredicted RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 KCNA3P22001 575 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ACVR2AP27037 513 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 PRKAR1BP31321 381 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 GRIA3P42263 894 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ALDH9A1P49189 494 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 NANOS3P60323 173 aaKnown RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 ZNF543Q08ER8 600 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 BMPR2Q13873 1038 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 DAG1Q14118 895 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ARHGEF7Q14155 803 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ZIK1Q3SY52 487 aaPredicted RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 DEPDC1Q5TB30 811 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 KIAA0895LQ68EN5 471 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 TOGARAM2Q6ZUX3 1019 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 RNF44Q7L0R7 432 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 GRASPQ7Z6J2 395 aaPredicted RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 PEG10Q86TG7 708 aaKnown RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 DTX2Q86UW9 622 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ENAHQ8N8S7 591 aaPredicted RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 OSCP1Q8WVF1 389 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ATG4AQ8WYN0 398 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 IQCDQ96DY2 449 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 TNIP3Q96KP6 325 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 SNX22Q96L94 193 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 NAA15Q9BXJ9 866 aaKnown RBP3.87□□□□□ -1.79
USP28-210ENST00000542033 CHST8Q9H2A9 424 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 GLOD4Q9HC38 313 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 XPNPEP3Q9NQH7 507 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 ZNF212Q9UDV6 495 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 MID2Q9UJV3 735 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 SSX2IPQ9Y2D8 614 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 CDY1Q9Y6F8 540 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 SALL3Q9BXA9 1300 aa3.87□□□□□ -1.79
USP28-210ENST00000542033 DCAF1Q9Y4B6 1507 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 WDR27A2RRH5 827 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 HMGB1P1B2RPK0 211 aaPredicted RBP3.86□□□□□ -1.79
USP28-210ENST00000542033 VWC2LB2RUY7 222 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 F8W8V4 182 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 H7C4K7 107 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 SRGAP2O75044 1071 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 URI1O94763 535 aaPredicted RBP3.86□□□□□ -1.79
USP28-210ENST00000542033 ANXA2P07355 339 aaKnown RBP3.86□□□□□ -1.79
USP28-210ENST00000542033 TPH1P17752 444 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 IL1R2P27930 398 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 STT3AP46977 705 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 PTDSS1P48651 473 aaKnown RBP3.86□□□□□ -1.79
USP28-210ENST00000542033 PRIM2P49643 509 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 RARRES1P49788 294 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 CPT1AP50416 773 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 CASP5P51878 434 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 ITGA8P53708 1063 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 MAPK10P53779 464 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 AK2P54819 239 aa3.86□□□□□ -1.79
USP28-210ENST00000542033 ELLP55199 621 aaPredicted RBP3.86□□□□□ -1.79
USP28-210ENST00000542033 SIM1P81133 766 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms