RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 APPL2Q8NEU8 664 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 CLEC4DQ8WXI8 215 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 USP6NLQ92738 828 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 PORCNQ9H237 461 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 SENP1Q9P0U3 644 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 NCANO14594 1321 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 CES2O00748 559 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 SNRPAP09012 282 aaKnown RBP16.77■□□□□ 0.28
VARS2-212ENST00000542001 EPHB2P29323 1055 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 TPI1P60174 286 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 DEUP1Q05D60 604 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 TREML2Q5T2D2 321 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 GRAMD1AQ96CP6 724 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 CCDC68Q9H2F9 335 aa16.77■□□□□ 0.28
VARS2-212ENST00000542001 CYP1A2P05177 515 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 NCAM1P13591 858 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 TPH1P17752 444 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 AMPD1P23109 780 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 RBL1P28749 1068 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 RPL10AP62906 217 aaKnown RBP16.77■□□□□ 0.27
VARS2-212ENST00000542001 OCRLQ01968 901 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.27
VARS2-212ENST00000542001 ARL13BQ3SXY8 428 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.27
VARS2-212ENST00000542001 SPON2Q9BUD6 331 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 STOML1Q9UBI4 398 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 NUDT5Q9UKK9 219 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.27
VARS2-212ENST00000542001 H3BRB1 525 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 DNM1LO00429 736 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 PTGER2P43116 358 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 METTL23Q86XA0 190 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 BRSK2Q8IWQ3 736 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 ABI1Q8IZP0 508 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 POU5F2Q8N7G0 328 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 TUT1Q9H6E5 874 aaKnown RBP16.76■□□□□ 0.27
VARS2-212ENST00000542001 XPNPEP1Q9NQW7 623 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 PCYOX1Q9UHG3 505 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 RPS6KL1Q9Y6S9 549 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 ASB14A6NK59 587 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 AIM2O14862 343 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 PLSCR1O15162 318 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 SNX3O60493 162 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 ZC3H11AO75152 810 aaKnown RBP eCLIP16.76■□□□□ 0.277e-22■■■■■ 33.3
VARS2-212ENST00000542001 AVPR1AP37288 418 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 KBTBD12Q3ZCT8 623 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 PRPF39Q86UA1 669 aaKnown RBP16.76■□□□□ 0.27
VARS2-212ENST00000542001 EDEM1Q92611 657 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 E2F7Q96AV8 911 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 ASCC2Q9H1I8 757 aaPredicted RBP16.76■□□□□ 0.27
VARS2-212ENST00000542001 SARS2Q9NP81 518 aaKnown RBP16.76■□□□□ 0.27
VARS2-212ENST00000542001 SCOCQ9UIL1 159 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 MYH15Q9Y2K3 1946 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 MICAL2O94851 1124 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 ADCYAP1R1P41586 468 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 WDR49Q8IV35 697 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 PAK5Q9P286 719 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 PACSIN3Q9UKS6 424 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 NR2E3Q9Y5X4 410 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 SLC4A7Q9Y6M7 1214 aa16.76■□□□□ 0.27
VARS2-212ENST00000542001 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 GOLGA8QA0A0J9YX86 632 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 GOLGA8OA6NCC3 632 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 C2orf71A6NGG8 1288 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 GOLGA8NF8WBI6 632 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 HMGCRP04035 888 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 TSTA3Q13630 321 aaPredicted RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 CCL15Q16663 113 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 OSBPL7Q9BZF2 842 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 FAM53CQ9NYF3 392 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 A8MUI8 341 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 PMPCBO75439 489 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 HSD17B4P51659 736 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 DBN1Q16643 649 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 PRAMEF19Q5SWL8 479 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 CD302Q8IX05 232 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 IPMKQ8NFU5 416 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 MRIQ9BWK5 157 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 ACSS2Q9NR19 701 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 DMAC2Q9NW81 257 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 EDIL3O43854 480 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 CD48P09326 243 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 TAF5Q15542 800 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 ZC3H12AQ5D1E8 599 aaKnown RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 MAP1SQ66K74 1059 aaPredicted RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 LAYNQ6UX15 382 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 CELF6Q96J87 481 aaKnown RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 MAGEB18Q96M61 343 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 DDIT4Q9NX09 232 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 SLC39A10Q9ULF5 831 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 UBTFL6P0CB48 400 aaPredicted RBP16.75■□□□□ 0.27
VARS2-212ENST00000542001 KCNA4P22459 653 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 TNFRSF8P28908 595 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
VARS2-212ENST00000542001 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms