RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CYTH4Q9UIA0 394 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 MYO7AQ13402 2215 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 HIDE1A8MVS5 230 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 M0QYV0 167 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 SLU7O95391 586 aaKnown RBP29.34■■■□□ 2.29
CCM2-218ENST00000541586 SMC1AQ14683 1233 aaKnown RBP29.34■■■□□ 2.29
CCM2-218ENST00000541586 STILQ15468 1287 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 PTPROQ16827 1216 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 CRYBG2Q8N1P7 616 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 THEM5Q8N1Q8 247 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 TSPAN16Q9UKR8 245 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 PACSIN2Q9UNF0 486 aaPredicted RBP29.34■■■□□ 2.29
CCM2-218ENST00000541586 VWA8A3KMH1 1905 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 ACAT1P24752 427 aaKnown RBP29.33■■■□□ 2.29
CCM2-218ENST00000541586 CDR1P51861 262 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 ARPP19P56211 112 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 PPP1R26Q5T8A7 1209 aaPredicted RBP29.33■■■□□ 2.29
CCM2-218ENST00000541586 ERICH1Q86X53 443 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 PIK3R5Q8WYR1 880 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 LMAN2LQ9H0V9 348 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 ABCB6Q9NP58 842 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 FAM49BQ9NUQ9 324 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 SSX2IPQ9Y2D8 614 aa29.33■■■□□ 2.29
CCM2-218ENST00000541586 H7C4K7 107 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 OAZ2O95190 189 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 CALB1P05937 261 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 PRLRP16471 622 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 IGFBP4P22692 258 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 LHX1P48742 406 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 MRPL58Q14197 206 aaKnown RBP29.32■■■□□ 2.28
CCM2-218ENST00000541586 ZNF280DQ6N043 979 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 PEX26Q7Z412 305 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 NT5DC3Q86UY8 548 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 MRPL43Q8N983 215 aaKnown RBP29.32■■■□□ 2.28
CCM2-218ENST00000541586 LPIN3Q9BQK8 851 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 CARD6Q9BX69 1037 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 HYOU1Q9Y4L1 999 aa29.32■■■□□ 2.28
CCM2-218ENST00000541586 GABRDO14764 452 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 GPD2P43304 727 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 GOLGA7BQ2TAP0 167 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 C11orf63Q6NUN7 778 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 RBM23Q86U06 439 aaKnown RBP29.31■■■□□ 2.28
CCM2-218ENST00000541586 UBA3Q8TBC4 463 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 MRPL38Q96DV4 380 aaKnown RBP29.31■■■□□ 2.28
CCM2-218ENST00000541586 OSBPL9Q96SU4 736 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 C2orf71A6NGG8 1288 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 FSCN2O14926 492 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 LILRB3O75022 631 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 WHAMMP3Q1A5X7 153 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 PTPN20Q4JDL3 420 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 ARHGAP17Q68EM7 881 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 PLEKHA7Q6IQ23 1121 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 RSPO2Q6UXX9 243 aaPredicted RBP29.31■■■□□ 2.28
CCM2-218ENST00000541586 TMEM209Q96SK2 561 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 PSMB7Q99436 277 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 DNAI2Q9GZS0 605 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 CDY1Q9Y6F8 540 aa29.31■■■□□ 2.28
CCM2-218ENST00000541586 TCP1P17987 556 aaKnown RBP29.3■■■□□ 2.28
CCM2-218ENST00000541586 MAMLD1Q13495 774 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 DEFB123Q8N688 67 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 LRRN4CLQ8ND94 238 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 BTBD6Q96KE9 485 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 TNIP3Q96KP6 325 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 RTP3Q9BQQ7 232 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 CLSTN3Q9BQT9 956 aa29.3■■■□□ 2.28
CCM2-218ENST00000541586 TRANK1O15050 2925 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 PER2O15055 1255 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 ZNF185O15231 689 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 CNPP09543 421 aaKnown RBP29.29■■■□□ 2.28
CCM2-218ENST00000541586 OR1D2P34982 312 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 MESDQ14696 234 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 RPS6KA1Q15418 735 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 PDE12Q6L8Q7 609 aaKnown RBP29.29■■■□□ 2.28
CCM2-218ENST00000541586 OR10T2Q8NGX3 314 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 CPXM1Q96SM3 734 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 EMILIN2Q9BXX0 1053 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 MRPL47Q9HD33 250 aaKnown RBP29.29■■■□□ 2.28
CCM2-218ENST00000541586 MTRRQ9UBK8 725 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 ANAPC7Q9UJX3 599 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 AMFRQ9UKV5 643 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 ALG6Q9Y672 507 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 SCINQ9Y6U3 715 aa29.29■■■□□ 2.28
CCM2-218ENST00000541586 TEX28O15482 410 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 ADAM12O43184 909 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 OR4Q2P0C623 313 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 CXCR5P32302 372 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 GTF2F1P35269 517 aaKnown RBP eCLIP29.28■■■□□ 2.281e-8■■■■■ 31.2
CCM2-218ENST00000541586 DNA2P51530 1060 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 PKDCCQ504Y2 493 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 GPR153Q6NV75 609 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 B3GALNT2Q8NCR0 500 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 COG1Q8WTW3 980 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 GAS2L1Q99501 681 aaPredicted RBP29.28■■■□□ 2.28
CCM2-218ENST00000541586 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.28■■■□□ 2.28
CCM2-218ENST00000541586 PARVAQ9NVD7 372 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 UQCRHLA0A096LP55 91 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 TMEM110-MUSTN1A8MSY1 372 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 UQCRHP07919 91 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 KLRC2P26717 231 aa29.28■■■□□ 2.28
CCM2-218ENST00000541586 PSMC1P62191 440 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms