RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 DEFB118Q96PH6 123 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 FMO2Q99518 471 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 DPEP3Q9H4B8 488 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 PIK3R2O00459 728 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 CLGNO14967 610 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 PDGFRBP09619 1106 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 VDRP11473 427 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 TAF6P49848 677 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 PLEKHA7Q6IQ23 1121 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 MAGEC3Q8TD91 643 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 FAM129AQ9BZQ8 928 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 ZNF518BQ9C0D4 1074 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 CNOT10Q9H9A5 744 aaKnown RBP16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 PARVAQ9NVD7 372 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 O00370 1275 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 MGRN1O60291 552 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 PPFIA2O75334 1257 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 DNAJC8O75937 253 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CYP3A5P20815 502 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 LILRA4P59901 499 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 MBTPS1Q14703 1052 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CPXM1Q96SM3 734 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 TXLNGYQ9BZA5 131 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 MRPL47Q9HD33 250 aaKnown RBP16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 TSPAN16Q9UKR8 245 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CCT8L1PA6NM43 557 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 A8MXQ7 604 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 GOLGA8SH3BPF8 625 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 ARVCFO00192 962 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 KIF1CO43896 1103 aaKnown RBP16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 POMCP01189 267 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CALB1P05937 261 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 THP07101 528 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 FGFR1P11362 822 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 EZRP15311 586 aaKnown RBP16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CHN1P15882 459 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 LMO2P25791 158 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 FAM26DQ5JW98 314 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 PPP1R26Q5T8A7 1209 aaPredicted RBP16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 UBL4BQ8N7F7 174 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 KBTBD7Q8WVZ9 684 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 P3H4Q92791 437 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 MCEEQ96PE7 176 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 LHX5Q9H2C1 402 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 SCINQ9Y6U3 715 aa16.06■□□□□ 0.16
CLPTM1-202ENST00000541297 CASTOR2A6NHX0 329 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 CLCNKBP51801 687 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 EIF3BP55884 814 aaKnown RBP16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 ELF3P78545 371 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 SV2CQ496J9 727 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 DNAJC24Q6P3W2 148 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 CCDC197Q8NCU1 140 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 CD101Q93033 1021 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 ZNF317Q96PQ6 595 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 PAAF1Q9BRP4 392 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 EPB41L4BQ9H329 900 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 USTQ9Y2C2 406 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 INPP5FQ9Y2H2 1132 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 PNPLA4P41247 253 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 DSC3Q14574 896 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 PPP1R7Q15435 360 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 CNGA2Q16280 664 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 HIBCHQ6NVY1 386 aaPredicted RBP16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 PPP1R2P3Q6NXS1 205 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 TRAF7Q6Q0C0 670 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 SLC43A3Q8NBI5 491 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 APPL2Q8NEU8 664 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 CENPTQ96BT3 561 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 SELENOSQ9BQE4 189 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 PHF24Q9UPV7 400 aa16.05■□□□□ 0.16
CLPTM1-202ENST00000541297 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 TLDC2A0PJX2 215 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 MIF4GDA9UHW6 222 aaKnown RBP16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 PEX5P50542 639 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 TTC39CQ8N584 583 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 FEZF2Q8TBJ5 459 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 MIEF2Q96C03 454 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 WNT8AQ9H1J5 351 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 CARD9Q9H257 536 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 GIT1Q9Y2X7 761 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 SMIM23A6NLE4 172 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 HUS1O60921 280 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 ATP6V1G2O95670 118 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 ERBB2P04626 1255 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 GPD2P43304 727 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 DCUN1D2Q6PH85 259 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 TBC1D31Q96DN5 1066 aa16.04■□□□□ 0.16
CLPTM1-202ENST00000541297 TSPAN18Q96SJ8 248 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms