RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PCDHA13Q9Y5I0 950 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
ATL3-204ENST00000540699 ZNF638Q14966 1978 aaKnown RBP11.25□□□□□ -0.61
ATL3-204ENST00000540699 KIF2AO00139 706 aaPredicted RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 FANCGO15287 622 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 CYP26A1O43174 497 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 MBTPS2O43462 519 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 DCXO43602 365 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 ZMYND10O75800 440 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 IPO7O95373 1038 aaKnown RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 TUBB4AP04350 444 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 OR4Q2P0C623 313 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 TNNT1P13805 278 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 CPB1P15086 417 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 CHRNB2P17787 502 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 LMO2P25791 158 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 GNL1P36915 607 aaPredicted RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 MAGEA1P43355 309 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 ETF1P62495 437 aaKnown RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 TSPY1Q01534 308 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 SPA17Q15506 151 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 CLUL1Q15846 466 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 RNF19BQ6ZMZ0 732 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 NOP9Q86U38 636 aaKnown RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 LRRTM3Q86VH5 581 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 SLC47A2Q86VL8 602 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 TTC39CQ8N584 583 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 SLC20A1Q8WUM9 679 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 DDX1Q92499 740 aaKnown RBP11.24□□□□□ -0.61
ATL3-204ENST00000540699 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 SFXN1Q9H9B4 322 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 CD207Q9UJ71 328 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 NAGPAQ9UK23 515 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 TFR2Q9UP52 801 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 TECTAO75443 2155 aa11.24□□□□□ -0.61
ATL3-204ENST00000540699 OBSL1O75147 1896 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 MTMR11A4FU01 709 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 HCRTO43612 131 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CILPO75339 1184 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 SEC24AO95486 1093 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 C8AP07357 584 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 HNRNPA1P09651 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATL3-204ENST00000540699 WEE2P0C1S8 567 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 SPATA31D3P0C874 917 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CYP11B1P15538 503 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ACAT1P24752 427 aaKnown RBP11.23□□□□□ -0.61
ATL3-204ENST00000540699 RAP1GAPP47736 663 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CDH8P55286 799 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ARPP19P56211 112 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 FMO1Q01740 532 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ITIH3Q06033 890 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ADCY1Q08828 1119 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 SMAD4Q13485 552 aaKnown RBP11.23□□□□□ -0.61
ATL3-204ENST00000540699 SMAD2Q15796 467 aaKnown RBP11.23□□□□□ -0.61
ATL3-204ENST00000540699 NFE2Q16621 373 aaPredicted RBP11.23□□□□□ -0.61
ATL3-204ENST00000540699 C10orf76Q5T2E6 689 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ALKBH5Q6P6C2 394 aaKnown RBP11.23□□□□□ -0.61
ATL3-204ENST00000540699 SPATA31D4Q6ZUB0 917 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 VPS36Q86VN1 386 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CRYBG2Q8N1P7 616 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 OR6B3Q8NGW1 331 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 SPPL2BQ8TCT7 592 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 SUSD6Q92537 303 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ZNF707Q96C28 371 aaPredicted RBP11.23□□□□□ -0.61
ATL3-204ENST00000540699 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATL3-204ENST00000540699 TSGA10Q9BZW7 698 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ADAM7Q9H2U9 754 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 SNX25Q9H3E2 840 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 ACP6Q9NPH0 428 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 LZTFL1Q9NQ48 299 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 CRTAC1Q9NQ79 661 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 TRIM10Q9UDY6 481 aa11.23□□□□□ -0.61
ATL3-204ENST00000540699 MYBPHLA2RUH7 354 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 BTNL10A8MVZ5 291 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 KRT86O43790 486 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 ATP2C2O75185 946 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 RFPL2O75678 378 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 KRT5P13647 590 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 USP8P40818 1118 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 PDE6CP51160 858 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 NDST1P52848 882 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 CDR2Q01850 454 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 MAPRE1Q15691 268 aaKnown RBP11.22□□□□□ -0.61
ATL3-204ENST00000540699 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 SLC39A12Q504Y0 691 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 LIN9Q5TKA1 542 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 GPR149Q86SP6 731 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
ATL3-204ENST00000540699 ATAD1Q8NBU5 361 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms