RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 SEC24AO95486 1093 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 HAPLN1P10915 354 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 CD19P15391 556 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 ATF6P18850 670 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 OR1D2P34982 312 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 USP8P40818 1118 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 CLCN4P51793 760 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 CLCN6P51797 869 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 ARID5AQ03989 594 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 PDE4CQ08493 712 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 TCEAL1Q15170 157 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 TDRD12Q587J7 1177 aaKnown RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 TMEM110Q86TL2 294 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 CEP57Q86XR8 500 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 C1orf131Q8NDD1 294 aaKnown RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 MYLIPQ8WY64 445 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 MRPL38Q96DV4 380 aaKnown RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 SPATA17Q96L03 361 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 HEXIM2Q96MH2 286 aaKnown RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 TTLL2Q9BWV7 592 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 PRDM12Q9H4Q4 367 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 KCND1Q9NSA2 647 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 ZNHIT6Q9NWK9 470 aaKnown RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 TAS2R14Q9NYV8 317 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 LMCD1Q9NZU5 365 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 ADAMTS1Q9UHI8 967 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 PCDHB5Q9Y5E4 795 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 USP3Q9Y6I4 520 aa11.16□□□□□ -0.62
VPS33A-204ENST00000540669 KIF26AQ9ULI4 1882 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-204ENST00000540669 M0QYV0 167 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 PJA2O43164 708 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 TGM5O43548 720 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 CLASP2O75122 1294 aaKnown RBP11.15□□□□□ -0.62
VPS33A-204ENST00000540669 ADH1AP07327 375 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 FAM200BP0CF97 657 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 CPB1P15086 417 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 HOXA9P31269 272 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 SCNN1AP37088 669 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 GFPT1Q06210 699 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-204ENST00000540669 ADCY1Q08828 1119 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 GRIN2CQ14957 1233 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 DUSP6Q16828 381 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 PPP1R15BQ5SWA1 713 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 TAF3Q5VWG9 929 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 PLPP4Q5VZY2 271 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 KIAA1841Q6NSI8 718 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 PPP1R2P3Q6NXS1 205 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 PMF1Q6P1K2 205 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 GPRIN1Q7Z2K8 1008 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 TMC7Q7Z402 723 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 PIGZQ86VD9 579 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 ATAD1Q8NBU5 361 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 HDAC7Q8WUI4 952 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.62
VPS33A-204ENST00000540669 VCPIP1Q96JH7 1222 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 CPXM1Q96SM3 734 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 CERS4Q9HA82 394 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 ENTPD7Q9NQZ7 604 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 SPTLC3Q9NUV7 552 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 YIPF1Q9Y548 306 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
VPS33A-204ENST00000540669 EPN1Q9Y6I3 576 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-204ENST00000540669 XIRP2A4UGR9 3374 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 HELZP42694 1942 aaKnown RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 F8VP50 259 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 STK25O00506 426 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 C2CD2LO14523 706 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 AP1G2O75843 785 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 MTA2O94776 668 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 CLSTN1O94985 981 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 CXCL14O95715 111 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 BDNFP23560 247 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 CYP2F1P24903 491 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 ADORA2BP29275 332 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 SKIV2LQ15477 1246 aaKnown RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 NAA35Q5VZE5 725 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 ACAD10Q6JQN1 1059 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 ALKBH5Q6P6C2 394 aaKnown RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 TMEM184AQ6ZMB5 413 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 TOGARAM2Q6ZUX3 1019 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 SPATA2LQ8IUW3 424 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 TMEM35BQ8NCS4 154 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 VN1R2Q8NFZ6 395 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 MAFAQ8NHW3 353 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 MCRS1Q96EZ8 462 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 TRMT2BQ96GJ1 504 aaKnown RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
VPS33A-204ENST00000540669 AVENQ9NQS1 362 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-204ENST00000540669 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms