RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 ZSWIM2Q8NEG5 633 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 SPACA7Q96KW9 195 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CNOT6LQ96LI5 555 aaKnown RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CBWD1Q9BRT8 395 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 POLMQ9NP87 494 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 MMP17Q9ULZ9 603 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CLIC4Q9Y696 253 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 ATP2C2O75185 946 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 PRPF6O94906 941 aaKnown RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 CSRP1P21291 193 aaKnown RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 LMO2P25791 158 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 OPRD1P41143 372 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 STAT6P42226 847 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 ZNF252P-AS1Q0IIN9 211 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 LMAN2Q12907 356 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 FOXC1Q12948 553 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 HSF5Q4G112 596 aaPredicted RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 TDRD10Q5VZ19 366 aaKnown RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 LPCAT2Q7L5N7 544 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 HS2ST1Q7LGA3 356 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 DDX42Q86XP3 938 aaKnown RBP eCLIP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 ADGRG2Q8IZP9 1017 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 CCDC33Q8N5R6 958 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 CXorf38Q8TB03 319 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 PIGKQ92643 395 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 MYLPFQ96A32 169 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 SLITRK1Q96PX8 696 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 PNKPQ96T60 521 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 NUSAP1Q9BXS6 441 aaKnown RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 LRRC27Q9C0I9 530 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 KIAA1586Q9HCI6 787 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 BCCIPQ9P287 314 aaKnown RBP eCLIP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 SIX4Q9UIU6 781 aa13.33□□□□□ -0.28
COPS7A-211ENST00000540408 MAP1BP46821 2468 aaKnown RBP13.33□□□□□ -0.28
COPS7A-211ENST00000540408 OBSL1O75147 1896 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 HCRTO43612 131 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 ADH1CP00326 375 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 APODP05090 189 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 WARSP23381 471 aaKnown RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 GNL1P36915 607 aaPredicted RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 EIF2DP41214 584 aaKnown RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 DPP6P42658 865 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 CASP5P51878 434 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 SLC7A9P82251 487 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 UAP1L1Q3KQV9 507 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 PREPLQ4J6C6 727 aaPredicted RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 EOGTQ5NDL2 527 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 UNQ6494/PRO21346Q6UXR6 183 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 NUDT18Q6ZVK8 323 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 FILIP1Q7Z7B0 1213 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 MDGA1Q8NFP4 955 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 MYCBPAPQ8TBZ2 947 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 CLIC6Q96NY7 704 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 PANK2Q9BZ23 570 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 SLC32A1Q9H598 525 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 TBC1D14Q9P2M4 693 aa13.32□□□□□ -0.28
COPS7A-211ENST00000540408 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 CNOT1A5YKK6 2376 aaKnown RBP13.32□□□□□ -0.28
COPS7A-211ENST00000540408 EML5Q05BV3 1969 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 ZNF840PA6NDX5 716 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.31□□□□□ -0.28
COPS7A-211ENST00000540408 GIPC1O14908 333 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
COPS7A-211ENST00000540408 CYP17A1P05093 508 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 TIE1P35590 1138 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 USP46P62068 366 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 IRX4P78413 519 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
COPS7A-211ENST00000540408 RESTQ13127 1097 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 DHCR24Q15392 516 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 SPDYCQ5MJ68 293 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 SCARA3Q6AZY7 606 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 TXNDC5Q8NBS9 432 aaKnown RBP13.31□□□□□ -0.28
COPS7A-211ENST00000540408 OR5B17Q8NGF7 314 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 KBTBD7Q8WVZ9 684 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 C8orf48Q96LL4 319 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 FNBP1Q96RU3 617 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 RNF38Q9H0F5 515 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 SMPD4Q9NXE4 827 aa13.31□□□□□ -0.28
COPS7A-211ENST00000540408 EVLQ9UI08 416 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms