RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CEP83Q9Y592 693 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PCDHB5Q9Y5E4 795 aa20.01■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MUC3AQ02505 3323 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ABLIM3O94929 683 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CENPCQ03188 943 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SMARCB1Q12824 385 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ACAD10Q6JQN1 1059 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TTC9BQ8N6N2 239 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ZMIZ2Q8NF64 920 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ZNF461Q8TAF7 563 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 KCNK16Q96T55 309 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ISCUQ9H1K1 167 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 THEGQ9P2T0 379 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ADGRG1Q9Y653 693 aa20■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ATP8B3O60423 1300 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 DLL1O00548 723 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 RTN2O75298 545 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SETSIPP0DME0 302 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MAP3K7CLP57077 242 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ADCY1Q08828 1119 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SPA17Q15506 151 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SPPL2BQ8TCT7 592 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CSNK1G1Q9HCP0 422 aa19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 AFF4Q9UHB7 1163 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-213ENST00000540022 XPO1O14980 1071 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 FTLP02792 175 aaPredicted RBP19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ATF2P15336 505 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 NSFP46459 744 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 DUSP4Q13115 394 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PDCLQ13371 301 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TPGS2Q68CL5 300 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PMF1Q6P1K2 205 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ADGRD2Q7Z7M1 963 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 C2orf15Q8WU43 125 aaKnown RBP19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 COL25A1Q9BXS0 654 aaPredicted RBP19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 EMILIN2Q9BXX0 1053 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PACSIN1Q9BY11 444 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 LMAN2LQ9H0V9 348 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ABCB6Q9NP58 842 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TJP2Q9UDY2 1190 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SLC27A5Q9Y2P5 690 aa19.98■□□□□ 0.79
TNFRSF1A-213ENST00000540022 F8VP50 259 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 GABBR2O75899 941 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 IPO7O95373 1038 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ADH1AP07327 375 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MAGEA1P43355 309 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MAGEA11P43364 429 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PLA2G4AP47712 749 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 RGS7P49802 495 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PTPN20Q4JDL3 420 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 C2CD6Q53TS8 623 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PDE12Q6L8Q7 609 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 VSTM1Q6UX27 236 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MON1BQ7L1V2 547 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PIGZQ86VD9 579 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PHF13Q86YI8 300 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MRPL38Q96DV4 380 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 CPXM1Q96SM3 734 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 DMAP1Q9NPF5 467 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PCDHA13Q9Y5I0 950 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SOAT2O75908 522 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SEC24AO95486 1093 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 HAPLN1P10915 354 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MMP8P22894 467 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 KLRC2P26717 231 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 GRIK1P39086 918 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SLC8A3P57103 927 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 KRT83P78385 493 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PTP4A2Q12974 167 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 LILRA6Q6PI73 481 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ERICH1Q86X53 443 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SCN4BQ8IWT1 228 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MCOLN2Q8IZK6 566 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 STK32AQ8WU08 396 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ATXN2LQ8WWM7 1075 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 PPP1R13BQ96KQ4 1090 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 C11orf70Q9BRQ4 267 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SLC4A5Q9BY07 1137 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ST7Q9NRC1 585 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TFR2Q9UP52 801 aa19.97■□□□□ 0.79
TNFRSF1A-213ENST00000540022 A0A0U1RQJ8 604 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 HHLA1C9JL84 531 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 TGM5O43548 720 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 GPR15P49685 360 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 GALCP54803 685 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SKIV2LQ15477 1246 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 DDR2Q16832 855 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MGAT5BQ3V5L5 792 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 C10orf76Q5T2E6 689 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 MMS22LQ6ZRQ5 1243 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 ATRIPQ8WXE1 791 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 NOX5Q96PH1 765 aa19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 SEPT5Q99719 369 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1A-213ENST00000540022 RCCD1A6NED2 376 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 E5RJQ4 531 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PIK3R2O00459 728 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PER2O15055 1255 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ERBB2P04626 1255 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 H2AFZP0C0S5 128 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CCDC175P0C221 793 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms