RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ASB3Q9Y575 518 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 WASF2Q9Y6W5 498 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 MCM3APO60318 1980 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 MYH10P35580 1976 aa8.08□□□□□ -1.12
CCDC60-204ENST00000539847 UMODL1Q5DID0 1318 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 TMEM120BA0PK00 339 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 MARCH6O60337 910 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 CDH16O75309 829 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 AKAP3O75969 853 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 TDP2O95551 362 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 LINGO3P0C6S8 592 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ATP4AP20648 1035 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 MZF1P28698 734 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 HOXD13P35453 343 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 PAPOLAP51003 745 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 SNRPFP62306 86 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 OCRLQ01968 901 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 CENPCQ03188 943 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 CLN3Q13286 438 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 AP3B2Q13367 1082 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 DYNC1I2Q13409 638 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 BFSP2Q13515 415 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 DRAP1Q14919 205 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 SLC5A9Q2M3M2 681 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 Q4G0T1 1027 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 SLC45A4Q5BKX6 768 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 TMEM31Q5JXX7 168 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 CCDC137Q6PK04 289 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 MTHFD1LQ6UB35 978 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ERICH1Q86X53 443 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 SLC13A5Q86YT5 568 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 LRRC47Q8N1G4 583 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 RBBP8NLQ8NC74 664 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 GLIS3Q8NEA6 775 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ASAP3Q8TDY4 903 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 GRK7Q8WTQ7 553 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ZDHHC1Q8WTX9 485 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 DCAF4Q8WV16 495 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 GLG1Q92896 1179 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 CD101Q93033 1021 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ITPKCQ96DU7 683 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 CRELD1Q96HD1 420 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 FRMD6Q96NE9 622 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 AGPAT1Q99943 283 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 MTG1Q9BT17 334 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 KLF16Q9BXK1 252 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 KIF9Q9HAQ2 790 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 SSU72Q9NP77 194 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 KCND2Q9NZV8 630 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 UVRAGQ9P2Y5 699 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 LNPEPQ9UIQ6 1025 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 DNAJC12Q9UKB3 198 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 STX8Q9UNK0 236 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.07□□□□□ -1.12
CCDC60-204ENST00000539847 XIRP2A4UGR9 3374 aa8.07□□□□□ -1.12
CCDC60-204ENST00000539847 ADGRA3Q8IWK6 1321 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 SCN10AQ9Y5Y9 1956 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 MEN1O00255 615 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 PRPF4O43172 522 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 EFCAB14O75071 495 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 RTN3O95197 1032 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 ZWINTO95229 277 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 ECEL1O95672 775 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 FOSP01100 380 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 CYP1A2P05177 515 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 KRT18P05783 430 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 CA3P07451 260 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TPBGLP0DKB5 382 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TAC1P20366 129 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 EDNRBP24530 442 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 CIITAP33076 1130 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 SSR1P43307 286 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 FMO5P49326 533 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 RABGGTBP53611 331 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 POLGP54098 1239 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TAP1Q03518 808 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 ENPEPQ07075 957 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 KLC1Q07866 573 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 CETN1Q12798 172 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 PTP4A2Q12974 167 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 IKQ13123 557 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TTLL4Q14679 1199 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 NUGGCQ68CJ6 796 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 ANO7Q6IWH7 933 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 EP400NLQ6ZTU2 488 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 ANKS1BQ7Z6G8 1248 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 HERC6Q8IVU3 1022 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 FBXO16Q8IX29 292 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 NELFCDQ8IXH7 590 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 DNERQ8NFT8 737 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 ALG3Q92685 438 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 FAM81BQ96LP2 452 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TSC22D3Q99576 134 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 WDR11Q9BZH6 1224 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 RANBP17Q9H2T7 1088 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 PDGFCQ9NRA1 345 aa8.06□□□□□ -1.12
CCDC60-204ENST00000539847 PAPOLBQ9NRJ5 636 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 TRMT13Q9NUP7 481 aaKnown RBP8.06□□□□□ -1.12
CCDC60-204ENST00000539847 FGFR1OP2Q9NVK5 253 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms