RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ORC1Q13415 861 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ZNF268Q14587 947 aaPredicted RBP13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SPOPLQ6IQ16 392 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SUMF1Q8NBK3 374 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ZBTB44Q8NCP5 570 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SH3RF2Q8TEC5 729 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 IER2Q9BTL4 223 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ELOVL4Q9GZR5 314 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 DUS2Q9NX74 493 aaKnown RBP13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 WNT6Q9Y6F9 365 aa13.57□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 VPS13AQ96RL7 3174 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 HLA-DRAP01903 254 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 KRT13P13646 458 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 P4HA1P13674 534 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 VAMP7P51809 220 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NRLP54845 237 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 USP4Q13107 963 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PDGFRLQ15198 375 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ZNF77Q15935 545 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SGSM1Q2NKQ1 1148 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ZACNQ401N2 412 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 HEATR6Q6AI08 1181 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ACOT1Q86TX2 421 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM35AQ86V20 835 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SPEM1Q8N4L4 309 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CPA6Q8N4T0 437 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 RUBCNQ92622 972 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TNIP3Q96KP6 325 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TTLL2Q9BWV7 592 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 VRTNQ9H8Y1 702 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 C2orf42Q9NWW7 574 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 EHD2Q9NZN4 543 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ATP8B3O60423 1300 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PTPRDP23468 1912 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 AKAP3O75969 853 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TDGF1P13385 188 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GCLMP48507 274 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FNTBP49356 437 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PDE6CP51160 858 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NOP14P78316 857 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 DMWDQ09019 674 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GRSF1Q12849 480 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TAF10Q12962 218 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PNOCQ13519 176 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CCINQ13939 588 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 LPAL2Q16609 132 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NAIF1Q69YI7 327 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FSTL4Q6MZW2 842 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM186BQ8IYM0 893 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GUF1Q8N442 669 aaKnown RBP13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 OSCP1Q8WVF1 389 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NELL1Q92832 810 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FBXO32Q969P5 355 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 EEF2KMTQ96G04 330 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CCDC34Q96HJ3 373 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CEP295NLQ96MC4 621 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SLITRK1Q96PX8 696 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 KCNK16Q96T55 309 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM126AQ9BYI3 521 aaPredicted RBP13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 FAM49BQ9NUQ9 324 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SMPD4Q9NXE4 827 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 HMGXB4Q9UGU5 601 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 MYO15AQ9UKN7 3530 aa13.55□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 F5P12259 2224 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ZNF840PA6NDX5 716 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 LEFTY2O00292 366 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 IKBKBO14920 756 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 LILRB5O75023 590 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 AP1G2O75843 785 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 EGFP01133 1207 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 CCDC130P13994 396 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 YWHAQP27348 245 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 HOXC13P31276 330 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 GJA4P35212 333 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 NDST1P52848 882 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 AMPD2Q01433 879 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 ADAM9Q13443 819 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 TMEM196Q5HYL7 178 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PKN3Q6P5Z2 889 aa13.54□□□□□ -0.24
TSPAN9-IT1-201ENST00000539784 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms