RNA–Protein interactions for RNA: ENST00000539655.1

AC243972.3-201, humanhuman

BASIC

Gene AC243972.3, Length 198 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243972.3-201ENST00000539655 KLF9Q13886 244 aaPredicted RBP3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 ODF1Q14990 250 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 FAM160B1Q5W0V3 765 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 ICE2Q659A1 982 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 SLC29A4Q7RTT9 530 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 MIER2Q8N344 545 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 FCRL4Q96PJ5 515 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 PCGF6Q9BYE7 350 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 CCDC8Q9H0W5 538 aaPredicted RBP3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 NRIP3Q9NQ35 241 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 DLL3Q9NYJ7 618 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 FEZ2Q9UHY8 353 aaPredicted RBP3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 SPEF1Q9Y4P9 236 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 PCDHA3Q9Y5H8 950 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 STRCQ7RTU9 1775 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 NUP155O75694 1391 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 NRXN3Q9Y4C0 1643 aa3.88□□□□□ -1.79
AC243972.3-201ENST00000539655 NEXMIFQ5QGS0 1516 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 PPP6CO00743 305 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 KIF3BO15066 747 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 ADAMTS3O15072 1205 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 PPM1DO15297 605 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 DTNBO60941 627 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 NHLRC4P0CG21 123 aaPredicted RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 PIM1P11309 404 aaPredicted RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 CHRM3P20309 590 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 PPIFP30405 207 aaKnown RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 CDKN1CP49918 316 aaPredicted RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 LOXL3P58215 753 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 BOP1Q14137 746 aaKnown RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 TMEM119Q4V9L6 283 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 EMC10Q5UCC4 262 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 HEATR3Q7Z4Q2 680 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 RGMAQ96B86 450 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 MTMR8Q96EF0 704 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 ZNF48Q96MX3 618 aaPredicted RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 BHMT2Q9H2M3 363 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 SLAMF7Q9NQ25 335 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 HESX1Q9UBX0 185 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 TNKSO95271 1327 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 LAMC1P11047 1609 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 IQGAP1P46940 1657 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 KANK1Q14678 1352 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 ANKRD30BQ9BXX2 1392 aa3.87□□□□□ -1.79
AC243972.3-201ENST00000539655 NLRP1Q9C000 1473 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 TRPM1Q7Z4N2 1603 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 M0QYG6 137 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 VPS4BO75351 444 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 KATNA1O75449 491 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 TJP3O95049 919 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 IL6RP08887 468 aaPredicted RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 ATXN1LP0C7T5 689 aaKnown RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 TYRP14679 529 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 PDCP20941 246 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 ZNF134P52741 427 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 EEFSECP57772 596 aaKnown RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 ETFDHQ16134 617 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 PTPN21Q16825 1174 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 TMEM240Q5SV17 173 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 RNF187Q5TA31 235 aaPredicted RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 PRAMEF17Q5VTA0 474 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 SLC9A4Q6AI14 798 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 TMEM108Q6UXF1 575 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 MAVSQ7Z434 540 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 YTHDF3Q7Z739 585 aaKnown RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 FANCBQ8NB91 859 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 RP9Q8TA86 221 aaKnown RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 PUS7Q96PZ0 661 aaKnown RBP3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 FSD1LQ9BXM9 530 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 DUSP22Q9NRW4 184 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 SH3BP4Q9P0V3 963 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 ABCF2Q9UG63 623 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 KNDC1Q76NI1 1749 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 SPATA31E1Q6ZUB1 1445 aa3.86□□□□□ -1.79
AC243972.3-201ENST00000539655 SLIT1O75093 1534 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 PRRT4C9JH25 899 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 DCLK1O15075 740 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 BMP15O95972 392 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 IGKV2-30P06310 120 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 PDHA1P08559 390 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 LIPAP38571 399 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 PHKA1P46020 1223 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 RECQLP46063 649 aaPredicted RBP3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 CEP78Q5JTW2 689 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 SLC18B1Q6NT16 456 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 GGT6Q6P531 493 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 USP45Q70EL2 814 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 PPP1R3BQ86XI6 285 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 CPA6Q8N4T0 437 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 PRPF38AQ8NAV1 312 aaKnown RBP3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 FAM46DQ8NEK8 389 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 DENND1AQ8TEH3 1009 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 TNPO1Q92973 898 aaKnown RBP3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 SLC46A1Q96NT5 459 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 PTDSS2Q9BVG9 487 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 LMBRD1Q9NUN5 540 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 SSX2IPQ9Y2D8 614 aa3.85□□□□□ -1.79
AC243972.3-201ENST00000539655 CHD2O14647 1828 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms