RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 LRRTM3Q86VH5 581 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 ZDHHC17Q8IUH5 632 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 C3orf20Q8ND61 904 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 SLC35G2Q8TBE7 412 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 SPPL2BQ8TCT7 592 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 RIN2Q8WYP3 895 aaPredicted RBP11.24□□□□□ -0.61
LEMD3-202ENST00000539442 KCTD13Q8WZ19 329 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 C18orf8Q96DM3 657 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 ARHGEF26Q96DR7 871 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 C16orf45Q96MC5 204 aaPredicted RBP11.24□□□□□ -0.61
LEMD3-202ENST00000539442 SAMD11Q96NU1 681 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 CPXM1Q96SM3 734 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 UBE2OQ9C0C9 1292 aaKnown RBP11.24□□□□□ -0.61
LEMD3-202ENST00000539442 SYNCQ9H7C4 482 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 CSNK1G1Q9HCP0 422 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
LEMD3-202ENST00000539442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.24□□□□□ -0.61
LEMD3-202ENST00000539442 KRT82Q9NSB4 513 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 PARVAQ9NVD7 372 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 TMLHEQ9NVH6 421 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 CTTNBP2NLQ9P2B4 639 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 LCMT1Q9UIC8 334 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 DUSP10Q9Y6W6 482 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 VWA8A3KMH1 1905 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 TCRBV5S1A1TA0A578 114 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 LCHNA4D1U4 455 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 C5orf67F2Z3F1 127 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 CLDN5O00501 218 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 RB1P06400 928 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 CPB1P15086 417 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 CTNNB1P35222 781 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 SCNN1AP37088 669 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 MAGEA11P43364 429 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 NOP2P46087 812 aaKnown RBP11.23□□□□□ -0.61
LEMD3-202ENST00000539442 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
LEMD3-202ENST00000539442 ETF1P62495 437 aaKnown RBP11.23□□□□□ -0.61
LEMD3-202ENST00000539442 UBE3AQ05086 875 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
LEMD3-202ENST00000539442 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 VSTM1Q6UX27 236 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 VPS52Q8N1B4 723 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 KLHL23Q8NBE8 558 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 ZNF564Q8TBZ8 553 aaPredicted RBP11.23□□□□□ -0.61
LEMD3-202ENST00000539442 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 B3GALT6Q96L58 329 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 SMOQ99835 787 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 NUP85Q9BW27 656 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 ZBP1Q9H171 429 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 ST7Q9NRC1 585 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
LEMD3-202ENST00000539442 FNIP2Q9P278 1114 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 SALL4Q9UJQ4 1053 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 PCDHB5Q9Y5E4 795 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 PCDHGC5Q9Y5F6 944 aa11.23□□□□□ -0.61
LEMD3-202ENST00000539442 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-202ENST00000539442 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-202ENST00000539442 MTMR11A4FU01 709 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 E5RJQ4 531 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 TULP2O00295 520 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 TRIM66O15016 1216 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 BUB1O43683 1085 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 MOCS3O95396 460 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 ERBB2P04626 1255 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 OR4Q2P0C623 313 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 CTSAP10619 480 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 TNNT1P13805 278 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 BDNFP23560 247 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 BMP8BP34820 402 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 RGS7P49802 495 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 RABGGTBP53611 331 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 MAP3K7CLP57077 242 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 GNG11P61952 73 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 MAMLD1Q13495 774 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 ARSIQ5FYB1 569 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 ZNF569Q5MCW4 686 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 TPGS2Q68CL5 300 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 DNAJC24Q6P3W2 148 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 PRSS55Q6UWB4 352 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-202ENST00000539442 RSPO2Q6UXX9 243 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-202ENST00000539442 XYLT1Q86Y38 959 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 TPCN2Q8NHX9 752 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 MCRS1Q96EZ8 462 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 CEP295NLQ96MC4 621 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 C11orf84Q9BUA3 381 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-202ENST00000539442 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 LRRC4Q9HBW1 653 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 OSGEPQ9NPF4 335 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
LEMD3-202ENST00000539442 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 CDY1Q9Y6F8 540 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
LEMD3-202ENST00000539442 KIAA1671Q9BY89 1806 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms