RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 P2RX7Q99572 595 aaKnown RBP6.48□□□□□ -1.37
CCDC7-209ENST00000539197 SARS2Q9NP81 518 aaKnown RBP6.48□□□□□ -1.37
CCDC7-209ENST00000539197 TCRBV5S1A1TA0A578 114 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 FCHO1O14526 889 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 ADAM10O14672 748 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 PRKCBP05771 671 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 ATP5F1P24539 256 aaPredicted RBP6.47□□□□□ -1.37
CCDC7-209ENST00000539197 LRPAP1P30533 357 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 TMEM240Q5SV17 173 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 OSCP1Q8WVF1 389 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 DPCDQ9BVM2 203 aaPredicted RBP6.47□□□□□ -1.37
CCDC7-209ENST00000539197 CIPCQ9C0C6 399 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 SCAF8Q9UPN6 1271 aaKnown RBP6.47□□□□□ -1.37
CCDC7-209ENST00000539197 SNX14Q9Y5W7 946 aa6.47□□□□□ -1.37
CCDC7-209ENST00000539197 FGBP02675 491 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 CCKBRP32239 447 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 SLC11A2P49281 568 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 E2F1Q01094 437 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 RAPGEF1Q13905 1077 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 KLHL22Q53GT1 634 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 CAND1Q86VP6 1230 aaKnown RBP6.46□□□□□ -1.38
CCDC7-209ENST00000539197 SAMD14Q8IZD0 417 aaPredicted RBP6.46□□□□□ -1.38
CCDC7-209ENST00000539197 TMEM171Q8WVE6 324 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 MTFMTQ96DP5 389 aaKnown RBP6.46□□□□□ -1.38
CCDC7-209ENST00000539197 CDK5RAP3Q96JB5 506 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 MRGPRX1Q96LB2 322 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 PRR25Q96S07 402 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 CGRRF1Q99675 332 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 TMX2Q9Y320 296 aa6.46□□□□□ -1.38
CCDC7-209ENST00000539197 H3BNC9 293 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 DSCR3O14972 297 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 CYP2C9P11712 490 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 LINC00205P59089 165 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 PSG6Q00889 435 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 ZNF268Q14587 947 aaPredicted RBP6.45□□□□□ -1.38
CCDC7-209ENST00000539197 ZNF813Q6ZN06 617 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 IRF2BP2Q7Z5L9 587 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 GRAMD1CQ8IYS0 662 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 ABRAQ8N0Z2 381 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 EFHD1Q9BUP0 239 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 EBF3Q9H4W6 596 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 TRMT13Q9NUP7 481 aaKnown RBP6.45□□□□□ -1.38
CCDC7-209ENST00000539197 ASIC5Q9NY37 505 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 LPAR3Q9UBY5 353 aa6.45□□□□□ -1.38
CCDC7-209ENST00000539197 ZNF267Q14586 743 aaPredicted RBP6.44□□□□□ -1.38
CCDC7-209ENST00000539197 AWAT1Q58HT5 328 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 RUSC1-AS1Q66K80 236 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 SHC4Q6S5L8 630 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 ZDHHC17Q8IUH5 632 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 C16orf52Q8NHV5 167 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 HPS3Q969F9 1004 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 NT5C1BQ96P26 610 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 MMS19Q96T76 1030 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 MESP1Q9BRJ9 268 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 ZNF580Q9UK33 172 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 STXBP5LQ9Y2K9 1186 aa6.44□□□□□ -1.38
CCDC7-209ENST00000539197 MYO1CO00159 1063 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 XRCC6P12956 609 aaKnown RBP eCLIP6.43□□□□□ -1.38
CCDC7-209ENST00000539197 KCNA3P22001 575 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 HOXD9P28356 352 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-209ENST00000539197 DGKEP52429 567 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 FAM187BQ17R55 369 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-209ENST00000539197 BCDIN3DQ7Z5W3 292 aaKnown RBP6.43□□□□□ -1.38
CCDC7-209ENST00000539197 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-209ENST00000539197 IZUMO1Q8IYV9 350 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 SLC15A4Q8N697 577 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 DNAJC5GQ8N7S2 189 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 ADAMTS18Q8TE60 1221 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 CUL5Q93034 780 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 COQ8BQ96D53 544 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 FYTTD1Q96QD9 318 aaKnown RBP6.43□□□□□ -1.38
CCDC7-209ENST00000539197 ADGRE3Q9BY15 652 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 CNNM1Q9NRU3 951 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 MTMR4Q9NYA4 1195 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 MED16Q9Y2X0 877 aa6.43□□□□□ -1.38
CCDC7-209ENST00000539197 TMEM232C9JQI7 657 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 THP07101 528 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 MYCLP12524 364 aaPredicted RBP6.42□□□□□ -1.38
CCDC7-209ENST00000539197 AKAP5P24588 427 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 WNT3P56703 355 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 KRT17Q04695 432 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 PTCHD3Q3KNS1 767 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 MEX3CQ5U5Q3 659 aaKnown RBP6.42□□□□□ -1.38
CCDC7-209ENST00000539197 NSMCE1Q8WV22 266 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 IP6K2Q9UHH9 426 aa6.42□□□□□ -1.38
CCDC7-209ENST00000539197 FER1L4A9Z1Z3 1794 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 TMEM233B4DJY2 109 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 GCATO75600 419 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 TMEM191BP0C7N4 346 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 RAB1AP62820 205 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 GHRHRQ02643 423 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 TRIM71Q2Q1W2 868 aaKnown RBP6.41□□□□□ -1.38
CCDC7-209ENST00000539197 MGAT5BQ3V5L5 792 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 ZBTB46Q86UZ6 589 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 SIRT6Q8N6T7 355 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 MAP3K14Q99558 947 aa6.41□□□□□ -1.38
CCDC7-209ENST00000539197 C17orf80Q9BSJ5 609 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms