RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 B4GALT3O60512 393 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FARP2O94887 1054 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SIX3O95343 332 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CYP3A4P08684 503 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NR2F1P10589 423 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MYCLP12524 364 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 KLRK1P26718 216 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ECHS1P30084 290 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MRE11P49959 708 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PAPOLAP51003 745 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF134P52741 427 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MAPK10P53779 464 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GP2P55259 537 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ATP2C1P98194 919 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SLFN5Q08AF3 891 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 BAATQ14032 418 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SEMA3AQ14563 771 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TIGD6Q17RP2 521 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PTCHD3Q3KNS1 767 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 DCAF12L1Q5VU92 463 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MCTP2Q6DN12 878 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ANKRD16Q6P6B7 361 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 C16orf54Q6UWD8 224 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MMS22LQ6ZRQ5 1243 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 DAAM2Q86T65 1068 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FAM124AQ86V42 546 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TMTC1Q8IUR5 882 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CACNA2D3Q8IZS8 1091 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CLASRPQ8N2M8 674 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LRRC71Q8N4P6 559 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 OR52N2Q8NGI0 321 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MPLKIPQ8TAP9 179 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CSGALNACT1Q8TDX6 532 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PIGOQ8TEQ8 1089 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF483Q8TF39 744 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SLC22A17Q8WUG5 538 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ALG3Q92685 438 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PRR11Q96HE9 360 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MESP1Q9BRJ9 268 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 THAP7Q9BT49 309 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 EPB41L4BQ9H329 900 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 IL21RQ9HBE5 538 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LTB4R2Q9NPC1 389 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 OBP2BQ9NPH6 170 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 BEX4Q9NWD9 120 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MIS18AQ9NYP9 233 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 AFF4Q9UHB7 1163 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NRBP1Q9UHY1 535 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CDH22Q9UJ99 828 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FZD1Q9UP38 647 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MAN2B2Q9Y2E5 1009 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CYP3A7-CYP3A51PA0A087WV96 503 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A0A087X0M5 115 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1B0GX30 115 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 RHPN2P1A8MT19 583 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MFAP3LO75121 409 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 KIF20AO95235 890 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ITGB3P05106 788 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ELANEP08246 267 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MYZAPP0CAP1 466 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 RARBP10826 455 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FGFR2P21802 821 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CYP3A7P24462 503 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZFP36P26651 326 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GABRB3P28472 473 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MAPK4P31152 587 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PSMC2P35998 433 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TIRAPP58753 221 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PPP2CBP62714 309 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PPP2CAP67775 309 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SRSF3P84103 164 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LMOD3Q0VAK6 560 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GRM1Q13255 1194 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PFKFB4Q16877 469 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LRRC24Q50LG9 513 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC93Q567U6 631 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 METRNLQ641Q3 311 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 UNC13DQ70J99 1090 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 EXOC3L1Q86VI1 746 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 C16orf71Q8IYS4 520 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NRSN1Q8IZ57 195 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PQLC1Q8N2U9 271 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC33Q8N5R6 958 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 OR6B3Q8NGW1 331 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 OTUD7AQ8TE49 926 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 WDR60Q8WVS4 1066 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ATL1Q8WXF7 558 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ERO1AQ96HE7 468 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZFYVE19Q96K21 471 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 RPL10LQ96L21 214 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LBHD1Q9BQE6 289 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 HERC2P3Q9BVR0 1158 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SPON1Q9HCB6 807 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SRRDQ9UH36 339 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 UTYO14607 1347 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FER1L4A9Z1Z3 1794 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A0A0B4J269 797 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A6NCN8 305 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MARCH11A6NNE9 402 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GOLGA6L6A8MZA4 724 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms