RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 FGF18O76093 207 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 ERBB2P04626 1255 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 CA8P35219 290 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 GABRB2P47870 512 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 MAP3K7CLP57077 242 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 PTP4A2Q12974 167 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 FAM102AQ5T9C2 384 aaPredicted RBP16.24■□□□□ 0.19
VAMP1-207ENST00000539047 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 PLEKHA7Q6IQ23 1121 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 C11orf63Q6NUN7 778 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 VSTM1Q6UX27 236 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 CLEC20AQ6ZU45 233 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 GPR65Q8IYL9 337 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 RNF168Q8IYW5 571 aaPredicted RBP16.24■□□□□ 0.19
VAMP1-207ENST00000539047 B3GALT6Q96L58 329 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 SAMD11Q96NU1 681 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 PKMYT1Q99640 499 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 SLC4A5Q9BY07 1137 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 UBXN6Q9BZV1 441 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 PNPLA8Q9NP80 782 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 MRPL17Q9NRX2 175 aaKnown RBP16.24■□□□□ 0.19
VAMP1-207ENST00000539047 JRKLQ9Y4A0 524 aa16.24■□□□□ 0.19
VAMP1-207ENST00000539047 C2CD2LO14523 706 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 FBXO21O94952 628 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 ABL1P00519 1130 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 LCP1P13796 627 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 BDNFP23560 247 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 SCNN1AP37088 669 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 GRIK1P39086 918 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 DSG1Q02413 1049 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 GPR17Q13304 367 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 CFAP221Q4G0U5 840 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 C2CD6Q53TS8 623 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 PMF1Q6P1K2 205 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 PRSS55Q6UWB4 352 aaPredicted RBP16.23■□□□□ 0.19
VAMP1-207ENST00000539047 PEX26Q7Z412 305 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 PIGZQ86VD9 579 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 XYLT1Q86Y38 959 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 VPS52Q8N1B4 723 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 FBXO22Q8NEZ5 403 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.23■□□□□ 0.19
VAMP1-207ENST00000539047 FEZF2Q8TBJ5 459 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 KCTD13Q8WZ19 329 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 GOLGA1Q92805 767 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 TMEM209Q96SK2 561 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 TRIM62Q9BVG3 475 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 IRX2Q9BZI1 471 aaPredicted RBP16.23■□□□□ 0.19
VAMP1-207ENST00000539047 OSGEPQ9NPF4 335 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 CHST7Q9NS84 486 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 IP6K2Q9UHH9 426 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 CYTH4Q9UIA0 394 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 CDY1Q9Y6F8 540 aa16.23■□□□□ 0.19
VAMP1-207ENST00000539047 GRID2IPA4D2P6 1211 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 TMEM110-MUSTN1A8MSY1 372 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 SPOPO43791 374 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 OR4Q2P0C623 313 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 KRT3P12035 628 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 MAGEA11P43364 429 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 ADIGQ0VDE8 80 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 MAMLD1Q13495 774 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 MESDQ14696 234 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 FAM183BPQ6ZVS7 135 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 PHLDB2Q86SQ0 1253 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 TMEM110Q86TL2 294 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 SCN4BQ8IWT1 228 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 MCEEQ96PE7 176 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 WDR24Q96S15 920 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 C11orf84Q9BUA3 381 aaPredicted RBP16.22■□□□□ 0.19
VAMP1-207ENST00000539047 PRO3102Q9H379 93 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 CSNK1G1Q9HCP0 422 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
VAMP1-207ENST00000539047 SALL4Q9UJQ4 1053 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 AMFRQ9UKV5 643 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 PCDHA11Q9Y5I1 949 aa16.22■□□□□ 0.19
VAMP1-207ENST00000539047 SIGLEC16A6NMB1 481 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 BUB1BO60566 1050 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-207ENST00000539047 EFEMP2O95967 443 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 BMPR1AP36894 532 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 SLC1A1P43005 524 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 RPL10AP62906 217 aaKnown RBP16.21■□□□□ 0.19
VAMP1-207ENST00000539047 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 UBE3AQ05086 875 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 TUBB2AQ13885 445 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 SHHQ15465 462 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 CCDC142Q17RM4 750 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 EFHC1Q5JVL4 640 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 TPGS2Q68CL5 300 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 SLC8B1Q6J4K2 584 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 PAQR9Q6ZVX9 377 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 TAS1R1Q7RTX1 841 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 LRRTM3Q86VH5 581 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 KLHL23Q8NBE8 558 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 MCRS1Q96EZ8 462 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 TUBB2BQ9BVA1 445 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 CNGB3Q9NQW8 809 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 ENTPD7Q9NQZ7 604 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 TMLHEQ9NVH6 421 aa16.21■□□□□ 0.19
VAMP1-207ENST00000539047 COG5Q9UP83 839 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms